CoVDB Coronavirus Database (v3)   
Strain
Avian_KJ425511 (Region: China;  Strain: Infectious bronchitis virus strain ck/CH/LSD/110529, complete genome.;  Date: 29-May-11)
Gene
5a protein
Description
Annotated in NCBI,  5a protein
Location
KJ425511(+):25488-25685
GenBank Accession
AHX26133.1
 

Sequence

CDS
ATGAAATGGCTGACTAGTTTTGGAAGAGCAGTTATTTCTTGTTATAAAGCCCTACTATTAACTCAGTTAAGAGTATTAGATAGGTTAATTTTAGATCACGGACCAAAACGCGTCTTAACGTGTGGTAGGCGAGTGCTTTTATCTCAATTAGATTTAGTTTATAGGTTGGCATATACGCCCACCCAATCGCTGGTATGA
Protein
MKWLTSFGRAVISCYKALLLTQLRVLDRLILDHGPKRVLTCGRRVLLSQLDLVYRLAYTPTQSLV

Summary

Uniprot
A0A1P8FCL2  
EMBL
KX219801    APV46189.1   
Pfam
PF06336   Corona_5a
Interpro
IPR009404   Corona_5a
ProteinModelPortal
A0A1P8FCL2  

Ontologies

Subcellular Location

From MSLVP
Single-Pass Membrane

Topology

Length:
65
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.34097
Exp number, first 60 AAs:
0.34073
Total prob of N-in:
0.32213
outside
1  -  65
 
 
Copyright@ 2018-2023    Any Comments and suggestions mail to:  zhuzl@cqu.edu.cn, mg@cau.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号
In processing...
Login to ASFVdb
Email
Password
Please go to Regist if without an account.
If you have forgotten your password, you can once again Regist an account with a registed or new email.
Cancel Go
Change my password
Enter new password
Reenter new password
Cancel Go
Regist an account of ASFVdb
It is required that you provide your institutional e-mail address (with edu or org in the domain) as confirmation of your affiliation.
Enter email
Reenter email
First Name
Last Name
Institution
You can directly go to if with an account.
Cancel Regist
Registraion Success
Your password has been sent to your email.
Please check it and login later.
Welcome to use ASFVdb.
OK