Strain
Bat_KJ473796
(Region: China; Strain: Bat coronavirus 1A; Date: 2012)
Gene
membrane glycoprotein
Description
Annotated in NCBI,
membrane glycoprotein
Location
GenBank Accession
Full name
Membrane protein
Alternative Name
E1 glycoprotein
Matrix glycoprotein
Membrane glycoprotein
Matrix glycoprotein
Membrane glycoprotein
Sequence
CDS
ATGATTAAGTTTATTATTCTGTTTTGCGCCTTTTTAGGCGTTATGTATGCAGAAGAAGTTGATTCTACTGCTACACCACCCATAACTGACAAAATTCCTTTGAGTGAAGTTATGGAACATTTAAGAAACTGGAACTTCAGCTGGAACATAGTGCTTACTGTCTTTTTGATAGTAATGCAGTATGGTCATTTCAAATACTCGACCATTTTGTATGGTTTGAAAATGCTTGTGCTTTGGCTTCTTTGGCCTCTTGTGCTTGCACTCTCAATTTTCGATGCATGGTCGACATTTGGGCAGAAGTGGGTTATGTTTGCTTTTAGCATCGTTATGGCCTGCACAACACTAGTGCTGTGGTTGATGTATTTCATCAACAGTTTCAGGCTTTATAGAAGAACACAGTCATTCTGGGCATTTAACCCAGAAACTGATGCCATAATTACAATCTCTGTTTTTGGAAAGACAGTCGCTATTCCAGTACTGGTACCTCCTACAGGCATTACGTTGACAGTTCTTAGTGGAAAGCTCCTTGTGGAGGGCATACCGGTTGCTAACGGAATCACGGTGGGACAACTACCTGAATTCGTAACTGTTGCCAAAGCTACCACTACAATTATCTATCGACGTGCCGGAAGGTCACTGAATGCTAAAACCCAGACCGGATGGGCATTCTATGTACGTGCAAAGAATGGCGACTATTCTGCTATTATGACGATGGCAGATTCATTTTCCGAAAATGAAAGATTGTTACATTTAGTTTAA
Protein
MIKFIILFCAFLGVMYAEEVDSTATPPITDKIPLSEVMEHLRNWNFSWNIVLTVFLIVMQYGHFKYSTILYGLKMLVLWLLWPLVLALSIFDAWSTFGQKWVMFAFSIVMACTTLVLWLMYFINSFRLYRRTQSFWAFNPETDAIITISVFGKTVAIPVLVPPTGITLTVLSGKLLVEGIPVANGITVGQLPEFVTVAKATTTIIYRRAGRSLNAKTQTGWAFYVRAKNGDYSAIMTMADSFSENERLLHLV
Summary
Function
Component of the viral envelope that plays a central role in virus morphogenesis and assembly via its interactions with other viral proteins.
Subunit
Homomultimer. Interacts with envelope E protein in the budding compartment of the host cell, which is located between endoplasmic reticulum and the Golgi complex. Forms a complex with HE and S proteins. Interacts with nucleocapsid N protein. This interaction probably participates in RNA packaging into the virus.
Uniprot
EMBL
Pfam
PF01635
Corona_M
Interpro
IPR002574
Corona_M
ProteinModelPortal
Ontologies
GO
Subcellular Location
From MSLVP
From Uniprot
Host Golgi apparatus membrane
Virion membrane
Virion membrane
Topology
Length:
252
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
90.2447599999999
Exp number, first 60 AAs:
21.30901
Total prob of N-in:
0.48070
POSSIBLE N-term signal
sequence
inside
1 - 68
TMhelix
69 - 91
outside
92 - 100
TMhelix
101 - 123
inside
124 - 143
TMhelix
144 - 166
outside
167 - 252
