Strain
Bat_KJ473800
(Region: China; Strain: Miniopterus bat coronavirus HKU8; Date: 2013)
Gene
nucleocapsid protein
Description
Annotated in NCBI,
nucleocapsid protein
Location
GenBank Accession
Sequence
CDS
ATGGCTTCTGTAAGTTTTTCTGATGAGACCCGCGGGCGTTCTGGTAAAGTCCCGCTGTCCCTTTATGCCCCATTGCGCACTACCGATGGTGCGCCATTTTTCCGTGCTATGCCTGGAAATGGTGTTCCTACCGGTATGGGTAAAAAAGACCAACAAGTTGGATACTGGAATGAACAGGTCCGCTGGCGCATGCAAAAGGGACAGCGAAAGAATCTGCCATCTAATTGGCATTTCTATTACCATGGAACTGGTCCGCATAAAGATGCTAAATTCAGAGAGAAGATTCAAGGTGTTTTCTGGGTTGCTAAGCAAGGCTCCAAGGTTGCCCCAACTGACTTGCCTACACGCAAGCGAAATCAGCCTACTATTGAGCCCCAGTTTGACTTTGATCTTCCAAAGAACATTGAAATTGTGACTGCCCCAAGTCAGCCTAATTCTCGCTCTAACTCACGCAGTCAGAGCAGTGGTGGCAGCAAGTCTCGTGCTAATTCTCAAAGCAGGGATAATTCAAACCAGCAAAAGACGCCCAAGGGCTCAACTAATAACTCAAGAAGTAATTCACAGGAACGTTCCCAGAAATCCAAAAAGGGCAAGGGCGGTAGTAATCAAGATGAGCTTGTTGCTGCTGTCCGTCAAGCTCTTATGGGCCTCGGTTTTCAACCGCAGGGCAATTCTGGAAAGACTGGTGGTAAGAAATCAGCTCCAAGCAGTGGAAAGTCAACCCCCAAGGACTCGCGCTCAAAATCGCCAGCGAGACCTCAGTCGACCAAGAAACAGCTTGATAAACCTGAATGGAAACGTATCCCCAACAAGTCTGAGGGCGTCATTGCCTGTTTCGGCCCGCGTGATGTTTCCCACAATTTCGGAACCAAGGGACTTGTCTCTGATGGAGTAGAGTTCCCTCAATTTCCGCAAATTGCTGAACTGATCCCAACTCAAGCAGCTCTTGTCTTCGGCAGTCGTGTCGAAGTTAAGGAGTTTCAGAATGAGTTTGAAATCAAGTACCACTACAAAATGAATGTTCCTAAGGACAATAAGAACCTCCCTGTCTTCCTCCAACAGGTTGATGCTTATTTGGACCCTTCTCGCGAGGACAAACCAAAGGAGCAGCGCAAACCTAAGGAAAAGAAGAAGGAAGAGACATCCCCTCAACTCAACCCTGCAGCACCTGTGTTCACACCTCCTGTTGTGCTGCCAGACGCTGTGTCTCAAGTTGAGTTTGAGATGGTTGACGAGGTTACTGATGCTGAGCCTGAGTCTTTTGCATGA
Protein
MASVSFSDETRGRSGKVPLSLYAPLRTTDGAPFFRAMPGNGVPTGMGKKDQQVGYWNEQVRWRMQKGQRKNLPSNWHFYYHGTGPHKDAKFREKIQGVFWVAKQGSKVAPTDLPTRKRNQPTIEPQFDFDLPKNIEIVTAPSQPNSRSNSRSQSSGGSKSRANSQSRDNSNQQKTPKGSTNNSRSNSQERSQKSKKGKGGSNQDELVAAVRQALMGLGFQPQGNSGKTGGKKSAPSSGKSTPKDSRSKSPARPQSTKKQLDKPEWKRIPNKSEGVIACFGPRDVSHNFGTKGLVSDGVEFPQFPQIAELIPTQAALVFGSRVEVKEFQNEFEIKYHYKMNVPKDNKNLPVFLQQVDAYLDPSREDKPKEQRKPKEKKKEETSPQLNPAAPVFTPPVVLPDAVSQVEFEMVDEVTDAEPESFA
Summary
Uniprot
EMBL
ProteinModelPortal
PDB
5N4K
E-value=9e-42 Score= 144 Identity=52.17%
Cov(Q)=32.70% Cov(P)=92.00%
3D Structure
Ontologies
Subcellular Location
From MSLVP
Topology
Length:
422
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0012
Exp number, first 60 AAs:
0.00099
Total prob of N-in:
0.00349
outside
1 - 422
