Strain
Bat_KJ473809
(Region: China; Strain: Nyctalus velutinus alphacoronavirus SC-2013; Date: 2013)
Gene
hypothetical protein ORF3
Description
Annotated in NCBI,
hypothetical protein ORF3
Location
GenBank Accession
Sequence
CDS
ATGTTTGGTTTGTTTCAACTCAATATACAAAATGCCGCAAGTGTGGTTCGAACGTCCATCGTTCCTAAACAACTACTACCTCATGTTGTCCCTATTGCGCATTTTAATCTGGGTATTGATTATTTATTTAGCAGTGTGTTTGTATACTATTTTGCTACTTATCGTGGCAATAGTATTAAGACTAACTGCGCCTTATTTGTTTGTCGGCTACTTGTCCTTTTTGTATACGCACCTTTACTACTTTACACAGGTGCATACATTGATGGTAGCCTCACTGCAATTATCCTGCTATGCAGGTTTTTCTATGTTGCGTACTTTGCTGTGCGTTTTCATAGCTTTTACTTTGTCTTACTTAATAGCCCAACATTAGCTTGGGTGTTTGGAAAGGCGTGGTATTATCATTTTGATGACTACACGTGTTTACGTGGGGGTGACTCTTATGTTCGTTTTGGGCCTCATTTTGTCCCCTTTGTTAGCGATAGAAACTTATTTCTCGCTTTGAGGGGTCGTGTGCAAAAAGACGTCTGTTTGGTTAGGCGTGTTGAGCTTATTAATGGCGACTTTTTGTACATCTTTGCTAGCGAGCCTGCTATAAGTGTCACATTCATCAATGATGTAAAGTAG
Protein
MFGLFQLNIQNAASVVRTSIVPKQLLPHVVPIAHFNLGIDYLFSSVFVYYFATYRGNSIKTNCALFVCRLLVLFVYAPLLLYTGAYIDGSLTAIILLCRFFYVAYFAVRFHSFYFVLLNSPTLAWVFGKAWYYHFDDYTCLRGGDSYVRFGPHFVPFVSDRNLFLALRGRVQKDVCLVRRVELINGDFLYIFASEPAISVTFINDVK
Summary
Uniprot
EMBL
Pfam
PF03053
Corona_NS3b
Interpro
IPR004293
Coronavirus_Orf3b
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Topology
Length:
207
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
82.35795
Exp number, first 60 AAs:
22.5017
Total prob of N-in:
0.00363
POSSIBLE N-term signal
sequence
outside
1 - 29
TMhelix
30 - 52
inside
53 - 64
TMhelix
65 - 87
outside
88 - 90
TMhelix
91 - 108
inside
109 - 112
TMhelix
113 - 135
outside
136 - 207
