Strain
Porcine_KJ567050
(Region: USA: Iowa; Strain: Porcine deltacoronavirus 8734/USA-IA/2014, complete genome.; Date: 20-Feb-14)
Gene
NS7 protein
Description
Annotated in NCBI,
NS7 protein
Location
GenBank Accession
Sequence
CDS
ATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAGGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAG
Protein
MEFRLTPPSNPLKTMATGCVTPDKSQVVLPFLHPMPFIILAQVPEEILSMVNSLLMIPQQPLVLLGLRVRELTLLLNLMLPNATPTILNISCYLSDSQPEMAQLKVSELTPSTLEEDLRSVEVAQDLNLLTPEAQAISPGNATNLHQLRYVVRPSIRLPSGLYPRVKPFLRYLATGLVLVPMSALQTLRRRVWLILASWL
Summary
Uniprot
EMBL
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Single-Pass Membrane
Topology
Length:
200
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.94812
Exp number, first 60 AAs:
0.07946
Total prob of N-in:
0.05035
outside
1 - 200
