Strain
Murine_KM349743
(Region: China; Strain: Betacoronavirus HKU24 strain HKU24-R05009I, complete genome.; Date: 17-May-12)
Gene
non-structural protein NS2a
Description
Annotated in NCBI,
non-structural protein NS2a
Location
GenBank Accession
Sequence
CDS
ATGGCTGTGGCATATGCTGACAAGCCAACTCATTTTATTAATTTTCCGCTTTCTCATTTTAACGAGTTTGTCGTGAAATTTAATAAGCTTCAGGCTACAATACTTGAAAGAGGTGTAGAATGCAAGCTACAAAATTGTCCGCACATTAGTGTCACTATGCTTGATATTAAGCCTAGTGATATTAATTCGGTTGATATTGCCATTCAGGAAGTTATAGATGACTTTTGCTTCGATGATGCGGCTCTTACATTTTGTAACCCGCACATTCTAGGCAGATGCATTGTCCTGGATGTTAAAGGTTGTGCAGAATTGCATGAAGATGTTGTTGAGTATATTAGAGAAAAAGGATGTGTTGCAGACCAGTCTAGAAAATGGATTGCACACTGCACCATCGCACAATTCACTAACATAACACCAAAACATCTTCCTGATGGTATAAAAGACCTACAATTCAATTGTACAATACCCATCAATCAATCTGCCCCTGCATACCTCGAATTGGTAGAGCTAGGTGCTGATAAAAAGGATGGGTTTTATAAATCACTAGTTAGTCATTGGATGGGAATCAGAAGTGTTGGTAAACCGCCCACTGACCATCTTAGTGCTATAATGGGCTATTGTTGTTTGGATATGATACGAGAAGAGCTACCTGAAGGAAGTTTTCCCGAGCAAGATGATGATGCTTGGAATAAGCTCGCGTATCATTATGATAACAACTTGTGGTTTTATCGATTTGTCTTCAAGAATAGTAAATATTTTCGAAAGACAATTCGTCACAAATGTTGTAATTGTGCAGGTGAGTTTTCATACACGTCAAGTGATGAAGACTGA
Protein
MAVAYADKPTHFINFPLSHFNEFVVKFNKLQATILERGVECKLQNCPHISVTMLDIKPSDINSVDIAIQEVIDDFCFDDAALTFCNPHILGRCIVLDVKGCAELHEDVVEYIREKGCVADQSRKWIAHCTIAQFTNITPKHLPDGIKDLQFNCTIPINQSAPAYLELVELGADKKDGFYKSLVSHWMGIRSVGKPPTDHLSAIMGYCCLDMIREELPEGSFPEQDDDAWNKLAYHYDNNLWFYRFVFKNSKYFRKTIRHKCCNCAGEFSYTSSDED
Summary
Uniprot
Pubmed
EMBL
ProteinModelPortal
PDB
4Z5V
E-value=2e-64 Score= 200 Identity=49.76%
Cov(Q)=75.00% Cov(P)=99.52%
3D Structure
Ontologies
Subcellular Location
From MSLVP
Cytoplasm
Topology
Length:
276
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00256
Exp number, first 60 AAs:
0.0024
Total prob of N-in:
0.06721
outside
1 - 276
