CoVDB Coronavirus Database (v3)   
Strain
Avian_KM454473 (Region: China;  Strain: Duck coronavirus isolate DK/GD/27/2014, complete genome.;  Date: 2014)
Gene
hypothetical protein
Description
Annotated in NCBI,  hypothetical protein
Location
KM454473(+):27246-27458
GenBank Accession
AKF17733.1
 

Sequence

CDS
ATGGTGTGTTTTACTGTTATTTCTTTTGTTTTCTATTATATTGCTCAAGGGTACACTTTTCTTACTGGTGAATTGTTCACCCGTCAAGAGCGAGCGTATGCTAGGGAGCTTATTTTAAAATTTGCTGTGCTTTATGACACAGTTTTGTTAATCTTTCTTGTTGGCTTTTTTGTTGGTAAGCGCAGCAAGCGGTCAGATAGGCATGTAGTTTGA
Protein
MVCFTVISFVFYYIAQGYTFLTGELFTRQERAYARELILKFAVLYDTVLLIFLVGFFVGKRSKRSDRHVV

Summary

Uniprot
A0A0F6SKM8  
Pubmed
26053682   
EMBL
KM454473    AKF17733.1   
Proteomes
UP000172234   
ProteinModelPortal
A0A0F6SKM8  

Ontologies

GO
GO:0016021  C:integral component of membrane

Subcellular Location

From MSLVP
Single-Pass Membrane

Topology

Length:
70
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
42.6925
Exp number, first 60 AAs:
42.68823
Total prob of N-in:
0.79470
POSSIBLE N-term signal
sequence
inside
1  -  4
TMhelix
5  -  27
outside
28  -  36
TMhelix
37  -  59
inside
60  -  70
 
 
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