Strain
Porcine_KP403802
(Region: China; Strain: Porcine epidemic diarrhea virus isolate HLJBY, complete genome.; Date: presumed 2015)
Gene
hypothetical protein
Description
Annotated in NCBI,
hypothetical protein
Location
GenBank Accession
Sequence
CDS
ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCGAAGTCTGCCAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATTTACTTCTTTGCACTGTTTAGAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTTTTCTTTCTGTTGCACACTTATTGGCAGGCTTTGTTTAG
Protein
MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFTSVFIYFFALFRASSLRRNYIMLAARFAVIFLSVAHLLAGFV
Summary
Uniprot
EMBL
Pfam
PF03053
Corona_NS3b
Interpro
IPR004293
Coronavirus_Orf3b
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Multi-Pass Membrane
Topology
Length:
91
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
39.98398
Exp number, first 60 AAs:
19.04004
Total prob of N-in:
0.03361
POSSIBLE N-term signal
sequence
outside
1 - 42
TMhelix
43 - 65
inside
66 - 71
TMhelix
72 - 89
outside
90 - 91
