Strain
Bat_KP886809
(Region: China; Strain: Bat SARS-like coronavirus YNLF_34C, complete genome.; Date: 23-May-13)
Gene
hypothetical protein 7a
Description
Annotated in NCBI,
hypothetical protein 7a
Location
GenBank Accession
Full name
SARS_X4 domain-containing protein
Sequence
CDS
ATGAAAATTATTCTCTTCTTGACATTGATTGTACTTGCAACTTGCGAGTTATATCACTATCAGGAGTGTGTTAGAGGTACTACTGTACTATTAGAAGAACCTTGCCCGTCAGGAACATACGAGGGCAACTCACCATTTCACCCTCTTGCTGACAATAAATTTGCACTAACTTGCACTAGCACACACTTTGCTTTTGCTTGTGCTGACGGTACCCGACATACCTATCAGCTGCGTGCAAGATCAGTTTCACCAAAACTTTTCATCAGACAAGAGGAGGTTCAACAGGAGCTCTACTCGCCACTTTTTCTCATTGTTGCTGCTCTAGTATTTTTAATACTTTGCTTCACCATTAAGAGAAAGACAGAATGA
Protein
MKIILFLTLIVLATCELYHYQECVRGTTVLLEEPCPSGTYEGNSPFHPLADNKFALTCTSTHFAFACADGTRHTYQLRARSVSPKLFIRQEEVQQELYSPLFLIVAALVFLILCFTIKRKTE
Summary
Uniprot
Pubmed
EMBL
Proteomes
Pfam
PF08779
SARS_X4
SUPFAM
SSF117066
SSF117066
Gene 3D
ProteinModelPortal
PDB
1YO4
E-value=2e-59 Score= 177 Identity=98.81%
Cov(Q)=68.85% Cov(P)=96.55%
3D Structure
Ontologies
Subcellular Location
From MSLVP
Host nucleus > host nucleolus. Host cytoplasm. Secreted.
Topology
Length:
122
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.7639
Exp number, first 60 AAs:
1.18291
Total prob of N-in:
0.09302
outside
1 - 94
TMhelix
95 - 117
inside
118 - 122
