Coronavirus Database

Strain

Avian_KR231009 (Region: Belgium; Strain: Infectious bronchitis virus strain B1648, complete genome.; Date: 1984)

Gene

non structural protein 6b

Description

Annotated in NCBI, non structural protein 6b

Location

KR231009(+):27137-27361

GenBank Accession

ALH21121.1

CDS

ATGGACTTGCTGCATTTGCTGTCACATTTTGTTAAACATTATTTTTGTGCTTTCCTATCAATTATTACAGGCATTGATTGTGATTATGTGCAATACTTAAGCTTCTTTTGGTTGCTTTTTGCTTGTTGTATTGTTGCTGTGCTTTTTATTATTGTGATTCTCATTAGTTTGCTTTATCGTAGAAGTTCAATAGTAAGAGTTAAGGAAGATAGGCATGTAGCTTGA

Protein

MDLLHLLSHFVKHYFCAFLSIITGIDCDYVQYLSFFWLLFACCIVAVLFIIVILISLLYRRSSIVRVKEDRHVA

Uniprot

A0A0N9QX53 A0A221J5Q3 A0A346PYQ3 A0A0S2ZX82 A0A516UWI1 G3C791 + More
G3C778 A0A516UWB2 G3C7A4 A0A4Y5QAK6 A0A1P8SFN1 X2J173 B3TD71 B3TD58 A0A1L5YNA2 G3C7F4 A0A1L5YNA6 A0A221J5R3 A0A0E3VZX0 A0A1X9Y2Y8 K7WJ36 A0A4Y5QS19 A0A0E3TI95 A0A516UWI5 A0A385H6J9 A0A516UWE6 A0A516UWE0 A0A516UWK4 A0A516UWI4 A0A516UWF2 A0A291B667 A0A240F541

Pubmed

26262637 28705717 30126059 30714035 26585962 21994806 + More
31439703 27793730 18514348 27938680 25712772 28495648 23166232 25843648 28917538

EMBL

KR231009 ALH21121.1 MF421319 ASM61970.1 MG021194 MH878976 + More
AXR85442.1 AYS76115.1 KR822424 ALQ43525.1 MK581207 QDQ69196.1 GU393332 ADV71737.1 GU393331 ADV71724.1 MK581200 MK581201 QDQ69105.1 QDQ69118.1 GU393333 ADV71750.1 MK878536 QCX19629.1 KX272465 APY20704.1 KJ128295 AHN49819.1 EU022526 ACB87503.1 EU022525 ACB87504.1 KU556806 KU556807 APP92752.1 APP92765.1 GU393337 ADV71800.1 KU556805 APP92739.1 MF421320 ASM61983.1 LN610099 CEK09118.1 KY805846 ARS23162.1 JX840411 AFX59337.1 MK142676 QCX41905.1 KP662631 AKC34141.1 MK581205 QDQ69170.1 MG197727 AXX83293.1 MK581203 QDQ69144.1 MK581202 QDQ69131.1 MK581208 QDQ69209.1 MK581206 QDQ69183.1 MK581204 QDQ69157.1 KY933089 KY933090 ATE90976.1 ATE90990.1 KX721498 APW81999.1

Proteomes

UP000097758 UP000138261 UP000160499 UP000138275 UP000146844 UP000154272 + More
UP000099410 UP000117980 UP000119508 UP000126934 UP000167873 UP000130326

ProteinModelPortal

A0A0N9QX53 A0A221J5Q3 A0A346PYQ3 A0A0S2ZX82 A0A516UWI1 G3C791 + More
G3C778 A0A516UWB2 G3C7A4 A0A4Y5QAK6 A0A1P8SFN1 X2J173 B3TD71 B3TD58 A0A1L5YNA2 G3C7F4 A0A1L5YNA6 A0A221J5R3 A0A0E3VZX0 A0A1X9Y2Y8 K7WJ36 A0A4Y5QS19 A0A0E3TI95 A0A516UWI5 A0A385H6J9 A0A516UWE6 A0A516UWE0 A0A516UWK4 A0A516UWI4 A0A516UWF2 A0A291B667 A0A240F541

GO

GO:0016021 C:integral component of membrane

From MSLVP

Host nucleus. Host cytoplasm.

Length:

74

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

31.09095

Exp number, first 60 AAs:

31.08938

Total prob of N-in:

0.38155

POSSIBLE N-term signal

sequence

outside

1 - 35

TMhelix

36 - 58

inside

59 - 74

Sequence

Summary

Ontologies

Subcellular Location

Topology