Strain
Porcine_KR818832
(Region: China; Strain: Porcine epidemic diarrhea virus strain XY2013, complete genome.; Date: 13-Feb)
Gene
membrane protein
Description
Annotated in NCBI,
membrane protein
Location
GenBank Accession
Sequence
CDS
ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATTGAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGGTACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTGGCACTTTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAACTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTATGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTAGCACTGGTTGGGCTTTCTATGTCCGGTCAAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTCTAA
Protein
MSNGSIPVDEVIEHLRNWNFTWNIILTVLLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSSTGWAFYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
Summary
Uniprot
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Host nucleus. Host cytoplasm.
Topology
Length:
226
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
79.81268
Exp number, first 60 AAs:
35.93262
Total prob of N-in:
0.03744
POSSIBLE N-term signal
sequence
outside
1 - 19
TMhelix
20 - 38
inside
39 - 42
TMhelix
43 - 65
outside
66 - 74
TMhelix
75 - 97
inside
98 - 226
