CoVDB Coronavirus Database (v3)   
Strain
Bat_KU182964 (Region: China;  Strain: Bat coronavirus isolate JTMC15, complete genome.;  Date: 13-Aug)
Gene
6 protein
Description
Annotated in NCBI,  6 protein
Location
KU182964(+):26419-26610
GenBank Accession
ANA96032.1
 

Sequence

CDS
ATGTTTCATCTCGTTGACTTTCAGGTTACAATAGCAGAGATGTTGATTATCATTATGAGGACTTTCAGGATTGCCATTTTGAATCTTGATGTACTAATAAGTTCAATAGTGAGACAATTATTTAAGCCTCTAACTAAGAAGAAATATCCTCAGTTAGATGATGAAGAACCTATGGAGTTAGATTATCCATAA
Protein
MFHLVDFQVTIAEMLIIIMRTFRIAILNLDVLISSIVRQLFKPLTKKKYPQLDDEEPMELDYP

Summary

Uniprot
A0A2R3SUW5  
EMBL
MG772933    MG772934    AVP78035.1    AVP78046.1   
Pfam
PF12133   Sars6
Interpro
IPR022736   SARS_NS6
ProteinModelPortal
A0A2R3SUW5  

Ontologies

Subcellular Location

From MSLVP
Host nucleus. Host cytoplasm.

Topology

Length:
63
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
17.72061
Exp number, first 60 AAs:
17.72061
Total prob of N-in:
0.11691
POSSIBLE N-term signal
sequence
outside
1  -  14
TMhelix
15  -  37
inside
38  -  63
 
 
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