Strain

Bat_KU973692 (Region: China; Strain: UNVERIFIED: SARS-related coronavirus isolate F46, complete genome.; Date: 2012)

Gene

protein 13

Description

Annotated in NCBI, protein 13

Location

KU973692(+):28102-28398

GenBank Accession

ARO76391.1

Sequence

CDS

ATGGACCCCAACAAAACCAACGTAGTGCCCCCCGCATTACATTTGGTGGACCCACAGATTCAGCTGACAATAACCAGAATGGAGGACGCAATGGGGCAAGGCCAAAACAACGCCGACCCCAAGGTTTACCCAATAATACTGCGTCTTGGTTCACAGCTCTCACTCAGCATGGCAAGGAGGAACTTAGATTCCCTCGAGGCCAGGGCGTTCCAATCAACACCAATAGTGGTCCAGATGACCAAATTGGCTACTACCGAAGAGCTACCCGACGAGTTCGTGGTGGTGACGGCAAAATGA

Protein

MDPNKTNVVPPALHLVDPQIQLTITRMEDAMGQGQNNADPKVYPIILRLGSQLSLSMARRNLDSLEARAFQSTPIVVQMTKLATTEELPDEFVVVTAK

Summary

Uniprot

A0A3Q8AD31

EMBL

KY352407 APO40587.1

Pfam

PF09399 SARS_lipid_bind

Interpro

IPR018542 SARS_lipid-bd
IPR037223 SARS_ORF-9b

SUPFAM

SSF141666 SSF141666

ProteinModelPortal

A0A3Q8AD31

PDB

2CME E-value=4e-48 Score= 147 Identity=86.67% Cov(Q)=91.84% Cov(P)=113.92%

3D Structure

View Sequence and Structure Alignments

Ontologies

Subcellular Location

From MSLVP

Host nucleus. Host cytoplasm.

Topology

Length:

Number of predicted TMHs:

Exp number of AAs in TMHs:

0.00313

Exp number, first 60 AAs:

0.00286

Total prob of N-in:

0.33737

outside

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