Strain
Porcine_KX499468
(Region: China; Strain: Transmissible gastroenteritis virus strain TGEV AHHF, complete genome.; Date: 22-Dec-15)
Gene
non-structural protein 3a
Description
Annotated in NCBI,
non-structural protein 3a
Location
GenBank Accession
Sequence
CDS
ATGGACATTGTCAAATCCATTTACACATCCGTAGATGCTGTACTTGACGAACTTGATTGTGCATACTTTGCTGTAACTCTTAAAGTAGAATTTAAGACTGGTAAATTACTTGTGTGTATAGGTTTTGGTGACACACTTCTTGCTGCTAAGGATAAAGCATATGCTAAGCTTGGTCTCTCCATTATTGAAGAAGTCAATAGTCATATAGTTGTTTAA
Protein
MDIVKSIYTSVDAVLDELDCAYFAVTLKVEFKTGKLLVCIGFGDTLLAAKDKAYAKLGLSIIEEVNSHIVV
Summary
Uniprot
EMBL
Proteomes
Pfam
PF04694
Corona_3
Interpro
IPR006784
Coronavirus_Orf3
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Host nucleus > host nucleolus. Host cytoplasm. Secreted.
Topology
Length:
71
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.09536
Exp number, first 60 AAs:
0.09517
Total prob of N-in:
0.46599
outside
1 - 71
