Strain
Porcine_KX534206
(Region: China; Strain: Porcine epidemic diarrhea virus isolate JS-2/2015, complete genome.; Date: 5-Jan-15)
Gene
hypothetical protein
Description
Annotated in NCBI,
hypothetical protein
Location
GenBank Accession
Sequence
CDS
ATGTTTCTTGGACTTCTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCGAAGTCTGCCAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTCTTATTTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTTTTCTTTCTGTTGCACACTTATTGGCAGACTTTGCTTAG
Protein
MFLGLLQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFTSVLIYFFALFKASSLRRNYIMLAARFAVIFLSVAHLLADFA
Summary
Uniprot
EMBL
Pfam
PF03053
Corona_NS3b
Interpro
IPR004293
Coronavirus_Orf3b
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Multi-Pass Membrane
Topology
Length:
91
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
39.0996
Exp number, first 60 AAs:
19.53684
Total prob of N-in:
0.03657
POSSIBLE N-term signal
sequence
outside
1 - 37
TMhelix
38 - 60
inside
61 - 68
TMhelix
69 - 88
outside
89 - 91
