Strain
Human_OC43_KX538968
(Region: Malaysia: Kuala Lumpur; Strain: Human coronavirus OC43 isolate MY-U464/12, complete genome.; Date: 9-May-12)
Gene
non-structural protein 5a
Description
Annotated in NCBI,
non-structural protein 5a
Location
GenBank Accession
Sequence
CDS
ATGGACATTTGGAGACCTGAGAAGAAATTTCTCCGTTATATTAACGGTTTTAATGTCTCAGAATTAGAAGATGCTTGTTTTAAATTTAACTATCAATTTCCTAAAGTAGGATATTGTAGAGTTCCTAGTCATGCTTGGTGCCGTAATCAAGGTAGATTTTGTGCTACATTCACTCTTTATGGTAAATCCAAACATTATGATAAATATTTTGGAGTAATAAATGGTTTCACAGCATTCGCTAATACTGTAGAGGATGCTGTTAACAAACTGGTTTTCTTAGCTGTTGACTTTATTACCTGGCGCAGACAGGAGTTAAATGTTTATGGCTGA
Protein
MDIWRPEKKFLRYINGFNVSELEDACFKFNYQFPKVGYCRVPSHAWCRNQGRFCATFTLYGKSKHYDKYFGVINGFTAFANTVEDAVNKLVFLAVDFITWRRQELNVYG
Summary
Uniprot
Proteomes
Pfam
PF04753
Corona_NS2
Interpro
IPR006841
Corona_NS2
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Host nucleus > host nucleolus. Host cytoplasm. Secreted.
Topology
Length:
109
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.35118
Exp number, first 60 AAs:
0.00035
Total prob of N-in:
0.32376
outside
1 - 109
