Strain
Porcine_KX839247
(Region: China; Strain: Porcine epidemic diarrhea virus strain 85-7-mutant1, complete genome.; Date: 15-Sep)
Gene
hypothetical protein
Description
Annotated in NCBI,
hypothetical protein
Location
GenBank Accession
Sequence
CDS
ATGTTGGCAGCGCGTTTTGCTGTCGTCTTTCTCTATTGCCCACTTTTATATTACTGTGGTGCACTTTTAGATGCAACTATTATTTGTTGCGCACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTTTTTATTATCTTTAATACTACGACACTTTCTTTTCTCAATGGTAAAGCAGCTTATTACGGCAAATCCGTTGTGATTCTAGAAGGTGGCGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTCGTTAGTAACATTGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACATCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTGTGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAATGA
Protein
MLAARFAVVFLYCPLLYYCGALLDATIICCALIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYGKSVVILEGGDHYITFGNSFVAFVSNIDLYLAIRGRQEADLHLLRTVELLDGKKLCVFSQHQIVGITNAAFDSIQLDEYATISE
Summary
Uniprot
EMBL
Pfam
PF03053
Corona_NS3b
Interpro
IPR004293
Coronavirus_Orf3b
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Multi-Pass Membrane
Topology
Length:
153
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
54.52236
Exp number, first 60 AAs:
33.58056
Total prob of N-in:
0.14927
POSSIBLE N-term signal
sequence
outside
1 - 19
TMhelix
20 - 42
inside
43 - 48
TMhelix
49 - 68
outside
69 - 82
TMhelix
83 - 102
inside
103 - 153
