Strain
Cow_KX982264
(Region: France; Strain: Bovine coronavirus isolate BCoV_2014_13, complete genome.; Date: 4-Mar-14)
Gene
32 kDa protein product
Description
Annotated in NCBI,
32 kDa protein product
Location
GenBank Accession
Sequence
CDS
ATGGCAGTCGCTTACGCAGACAAGCCTAACCACTTTATTAATTTTCCACTTACCCAGTTTCAGGGTTTTGTGTTAAATTATAAAGGTTTACAATTTCAACTTCTCGATGAAGGAGTGGATTGTAAAATACAAACAGCGCCTCACATTAGTCTTGCTATGCTGGATATTCAGCCTGAAGACTACAGAAGTGTTGATGTTGCTATTCAAGAAGTTATTGATGACATGCATTGGGGTGAGGGCTTTCAGATTAAATTTGAAAACCCCCATATCCTAGGAAGATGCATAGTTTTAGATGTTAAAGGTGTAGAAGAATTGCATGATGATTTAGTTAATTACATTCGTGATAAAGGTTGTGTTGCTGACCAATCCAGGAAATGGATTGGACATTGCACCATAGCCCAACTCACGGATGCTGCACTTTCCATTAAGGAAAATGTTGATTTTATAAACAGCATGCAATTCAATTATAAAATCACTATCAATCCCTCATCACCGGCTAGACTTGAAATAGTTAAGCTTGGTGCTGAAAAGAAAGATGGTTTTTATGAAACCATAGCTAGCCACTGGATGGGAATTCGTTTTGAATATAATCCACCCACTGATAAGCTAGCTAAGATTATGGGTTATTGTTGTTTAGAAGTGGTGCGTAAAGAGCTAGAAGAAGGTGATCTTCCCGAGAATGATGATGATGCTTGGTTTAAGCTATCGTACCATTATGAAAACAATTCTTGGTTCTTTCGACATGTCTACAGGAAAAGTTCTTATTTCCGTAAGTCTTGTCAAAATTTAGATTGTAATTGTTTGGGGTTTTATGAATCTTCATTTGAAGAAGACTAA
Protein
MAVAYADKPNHFINFPLTQFQGFVLNYKGLQFQLLDEGVDCKIQTAPHISLAMLDIQPEDYRSVDVAIQEVIDDMHWGEGFQIKFENPHILGRCIVLDVKGVEELHDDLVNYIRDKGCVADQSRKWIGHCTIAQLTDAALSIKENVDFINSMQFNYKITINPSSPARLEIVKLGAEKKDGFYETIASHWMGIRFEYNPPTDKLAKIMGYCCLEVVRKELEEGDLPENDDDAWFKLSYHYENNSWFFRHVYRKSSYFRKSCQNLDCNCLGFYESSFEED
Summary
Uniprot
Pubmed
EMBL
Proteomes
Pfam
PF05213
Corona_NS2A
Interpro
IPR039573
NS2A-like
ProteinModelPortal
PDB
4Z5V
E-value=3e-67 Score= 208 Identity=51.22%
Cov(Q)=73.74% Cov(P)=98.56%
3D Structure
Ontologies
KEGG
Subcellular Location
From MSLVP
Cytoplasm
Topology
Length:
278
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0422200000000001
Exp number, first 60 AAs:
0.04205
Total prob of N-in:
0.06664
outside
1 - 278
