CoVDB Coronavirus Database (v3)   
Strain
Human_OC43_KY014281 (Region: France;  Strain: Human coronavirus OC43 isolate 2002-04, complete genome.;  Date: 2002)
Gene
putative I protein
Description
Annotated in NCBI,  putative I protein
GenBank Accession
 

Sequence

CDS
ATGGCAACCAGCGCCAACTGCTGCCACGATGGTATTTTTACTATCTGGGAACAGGACCGCATGCTAAAGACCAGTACGGCACCGATATTGACGGAGTCTTCTGGGTCGCTAGCAACCAGGCTGATGTCAATACCCCGGCTGACATTGTCGATCGGGACCCAAGTAGCGATGAGGCTATTCCGACTAGGTTTCCGCCTGGTACGGTACTCCCTCAGGGTTACTATATTGAAGGCTCAGGAAGGTCTGCTCCTAATTCCAGATCTACTTCGCGCACATCCAGCAGAGCCTCTAGTGCAGGATCGCGTAGTAGAGCCAATTCTGGCAATAGAGCCCCTACCTCTGGTGTAA
Protein
MATSANCCHDGIFTIWEQDRMLKTSTAPILTESSGSLATRLMSIPRLTLSIGTQVAMRLFRLGFRLVRYSLRVTILKAQEGLLLIPDLLRAHPAEPLVQDRVVEPILAIEPLPLV

Summary

Uniprot
Pfam
PF03187   Corona_I
Interpro
IPR004876   Corona_nucI
ProteinModelPortal

Ontologies

Subcellular Location

From MSLVP
Host nucleus. Host cytoplasm.

Topology

Length:
115
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.42397
Exp number, first 60 AAs:
0.34691
Total prob of N-in:
0.47589
outside
1  -  115
 
 
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