CoVDB Coronavirus Database (v3)   
Strain
Canine_KY063617 (Region: China;  Strain: Canine coronavirus isolate HLJ-072, complete genome.;  Date: 1-Jul-16)
Gene
3A
Description
Annotated in NCBI,  3A
Location
KY063617(+):24712-24948
GenBank Accession
ASB15749.1
 

Sequence

CDS
ATGAGTCATTACAGGTCTTGTATGGACATTGTCAAATCTATTGACACATCCGTAGACGCTGTACTTGACGAACTTGATCGTGCATATTTTGCTGTGACTCTTAAAGTAGAATTCAAGACTGGTAAACTACTTGTGTGTATAGGTTTTGGTGACACACTTCTCGAGGCTAAGGACAAAGCATATGCTAAGCTTGGTCTCTCCATTATTGAAGAAGTCAATAGTCATACAGTTGTTTAA
Protein
MSHYRSCMDIVKSIDTSVDAVLDELDRAYFAVTLKVEFKTGKLLVCIGFGDTLLEAKDKAYAKLGLSIIEEVNSHTVV

Summary

Uniprot
C6GH96  
EMBL
FJ938052    ACT10866.1   
Proteomes
UP000114363   
Pfam
PF04694   Corona_3
Interpro
IPR006784   Coronavirus_Orf3
ProteinModelPortal
C6GH96  

Ontologies

Subcellular Location

From MSLVP
Host nucleus > host nucleolus. Host cytoplasm. Secreted.

Topology

Length:
78
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01799
Exp number, first 60 AAs:
0.01799
Total prob of N-in:
0.51611
inside
1  -  78
 
 
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