Strain
Bat_KY073746
(Region: Kenya; Strain: NL63-related bat coronavirus strain BtKYNL63-15, complete genome.; Date: 6-Aug-08)
Gene
ORF3 protein
Description
Annotated in NCBI,
ORF3 protein
Location
GenBank Accession
Sequence
CDS
ATGTTTGGGGGTTTGTTTCAAACCTCCATTGATTCAGTCATTAATGACAGCATTAAAGACATGCACCTGTCTGAGCAAACTGCCAATTTTCTTCATGACAAACTTGAACCCGTTAAAAAGGTGAGTGCTATCCCATTTTACTTGCTTATGAGTTTGTTTGTCGTTTACTTTGCACTCTTTAAGCCTAGGTCTCCTAGGTCTAGAGTGTTGATTTTGGCTGCTAAAGTGCTTATTGTGTTAATTTACGTACCTATACTCATGTGGTTTGGTGCGTATTTTGATGCTGTACTTATTGCAGTCACCATTCTGGCTCGCTTGTTGTATACTGGCTATTATGCTTATGTGTATAAAAATTGGGCCTTTGTCACTTTCAACACTCACGTGCTTTGCTTTGTCGTGGGCAAACCGTGGTTTTATGAAAAGTCTCACTATGGCCTAGAGTTTCTTGCCATTAGTGGAGGTGATCACTATGTCGCTTATGGTGGTCACACCGTCGCATTTGCTTCTGATAACGAGCTTTATGTCGCTATCAGAGGAAGTGTGGAAAAAGATCTTAAGCTTATGCGTAAGATCGAAATGTACAATGGCAATGCTCTTTATGTTTTTGCCGAGGAGCCTGTTGTGGGCATCGTCAACACTAGTTGTGACATTCAACTATACGAAGATGTTCCCACAATTAATTGA
Protein
MFGGLFQTSIDSVINDSIKDMHLSEQTANFLHDKLEPVKKVSAIPFYLLMSLFVVYFALFKPRSPRSRVLILAAKVLIVLIYVPILMWFGAYFDAVLIAVTILARLLYTGYYAYVYKNWAFVTFNTHVLCFVVGKPWFYEKSHYGLEFLAISGGDHYVAYGGHTVAFASDNELYVAIRGSVEKDLKLMRKIEMYNGNALYVFAEEPVVGIVNTSCDIQLYEDVPTIN
Summary
Uniprot
EMBL
Pfam
PF03053
Corona_NS3b
Interpro
IPR004293
Coronavirus_Orf3b
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Multi-Pass Membrane
Topology
Length:
227
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
67.87002
Exp number, first 60 AAs:
19.23419
Total prob of N-in:
0.00133
POSSIBLE N-term signal
sequence
outside
1 - 40
TMhelix
41 - 60
inside
61 - 68
TMhelix
69 - 91
outside
92 - 95
TMhelix
96 - 115
inside
116 - 227
