Strain
Bat_KY417146
(Region: China; Strain: Bat SARS-like coronavirus isolate Rs4231, complete genome.; Date: 17-Apr-13)
Gene
ORF7a
Description
Annotated in NCBI,
ORF7a
Location
GenBank Accession
Full name
SARS_X4 domain-containing protein
Sequence
CDS
ATGAAAATTATTCTCTTCCTGACATTGATTGCACTTGCATCTTGCGAGCTATATCACTATCAGGAGTGTGTTAGAGGTACAACTGTACTACTAAAAGAACCTTGCCCATCTGGAACCTACGAGGGCAATTCACCATTTCATCCTCTTGCTGATAACAAATTTGCACTAACTTGCACTAGCACCCACTTTGCTTTTGCTTGTGCTGACGGTACTAGACATACCTATCAGCTTCGTGCAAGATCAGTTTCACCAAAACTTTTCATCAGACAAGAGGAAGTTCACCAGGAGCTCTACTCACCGCTTTTTCTCATTGTTGCTGCTCTAGTATTTATAATACTTTGCTTCACCATTAAGAGAAAGACAGAATGA
Protein
MKIILFLTLIALASCELYHYQECVRGTTVLLKEPCPSGTYEGNSPFHPLADNKFALTCTSTHFAFACADGTRHTYQLRARSVSPKLFIRQEEVHQELYSPLFLIVAALVFIILCFTIKRKTE
Summary
Uniprot
Pubmed
EMBL
Proteomes
Pfam
PF08779
SARS_X4
SUPFAM
SSF117066
SSF117066
Gene 3D
ProteinModelPortal
PDB
1YO4
E-value=3e-59 Score= 177 Identity=98.81%
Cov(Q)=68.85% Cov(P)=96.55%
3D Structure
Ontologies
Subcellular Location
From MSLVP
Host nucleus > host nucleolus. Host cytoplasm. Secreted.
Topology
Length:
122
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.26737
Exp number, first 60 AAs:
0.53676
Total prob of N-in:
0.05636
outside
1 - 94
TMhelix
95 - 117
inside
118 - 122
