Strain
Porcine_KY419106
(Region: USA; Strain: Porcine hemagglutinating encephalomyelitis virus strain PHEV CoV USA-15TOSU1785, complete genome.; Date: 15-Aug-15)
Gene
nonstructural protein
Description
Annotated in NCBI,
nonstructural protein
Location
GenBank Accession
Sequence
CDS
ATGGACATCTGGTGTCCTGAAAAGAAATATCTCCGTTATACTAACGGATTTAATGTTTCAGAACTAGAAGATGTCTGTTTTAAATATAACTATCAATTTCCTAAAGTAGGATATTGTAGAGTTCCTAATTATGCTTGGTGCCGTAATCAAGGTAGGTTTTGTGTTACATTTACTTTGTACGGCAAATCCAAACATTATGATAATTATTTTGGAATAATAACTGGTTTCACAGTATTCTCTAATTCTTTAGAAGAAGCTGTTAATAAACTGGTTTTTCTAGCTGTTGACTTTATTACCTGGCGAAGCCAGTGTTTAAATGTTTATGGCTGA
Protein
MDIWCPEKKYLRYTNGFNVSELEDVCFKYNYQFPKVGYCRVPNYAWCRNQGRFCVTFTLYGKSKHYDNYFGIITGFTVFSNSLEEAVNKLVFLAVDFITWRSQCLNVYG
Summary
Uniprot
Proteomes
Pfam
PF04753
Corona_NS2
Interpro
IPR006841
Corona_NS2
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Host nucleus > host nucleolus. Host cytoplasm. Secreted.
Topology
Length:
109
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.61191
Exp number, first 60 AAs:
0.00218
Total prob of N-in:
0.42877
outside
1 - 109
