Strain

Porcine_KY419110 (Region: USA; Strain: Porcine hemagglutinating encephalomyelitis virus strain PHEV CoV USA-15TOSU1362, complete genome.; Date: 12-Aug-15)

Gene

nonstructural protein

Description

Annotated in NCBI, nonstructural protein

Location

KY419110(+):27593-27922

GenBank Accession

ARC95252.1

Sequence

CDS

ATGGACATCTGGTGCCCTGAAATGAAATATCTCCGTTATACTAACGGATTTAATGTCTCAGAACTAGAATATGTTTGTTTTAAATATAACTATCAATTTCCTAAAGTAGGATATTGTAGAGTTCCTAATCATGCTTGGTGCCGAAACCAAGGTAGTTTTTGTGCTACATTTACTTTGTATGGCAAATCCAAACATTATGATAATTATTTTGGAATAATAACTGGTTTCACAGCATTCTCTAATTCTTTAGAAGAAGCTGTTAATAAACTGGTTCTTTTAGCTGTTGACTTTATTACCTGGCGAAGCCAGAGTTTAAATGTTTATGGCTGA

Protein

MDIWCPEMKYLRYTNGFNVSELEYVCFKYNYQFPKVGYCRVPNHAWCRNQGSFCATFTLYGKSKHYDNYFGIITGFTAFSNSLEEAVNKLVLLAVDFITWRSQSLNVYG

Summary

Uniprot

A0A3G3NH38

EMBL

MH687969 MH687971 MH687972 MH687973 MH687974 MH687975 + More
MH687976 MH687977 MH687978 AYR18609.1 AYR18627.1 AYR18636.1 AYR18645.1 AYR18654.1 AYR18663.1 AYR18672.1 AYR18681.1 AYR18690.1

Pfam

PF04753 Corona_NS2

Interpro

IPR006841 Corona_NS2

ProteinModelPortal

A0A3G3NH38

Ontologies

Subcellular Location

From MSLVP

Host nucleus > host nucleolus. Host cytoplasm. Secreted.

Topology

Length:

109

Number of predicted TMHs:

Exp number of AAs in TMHs:

0.24687

Exp number, first 60 AAs:

0.00492

Total prob of N-in:

0.31396

outside

1 - 109