CoVDB Coronavirus Database (v3)   
Strain
Avian_KY805846 (Region: Egypt;  Strain: Infectious bronchitis virus isolate IBV/Ck/EG/CU/4/2014, complete genome.;  Date: 2014)
Gene
3a protein
Description
Annotated in NCBI,  3a protein
Location
KY805846(+):23851-24024
GenBank Accession
ARS23153.1
 

Sequence

CDS
ATGATTCAAAGCCCCACATCTTTTTTAATAGTGTTAATTCTTCTTTGGTGTAAACTTGCATTAAGTTGTTTTAAAGAGTGTGTTATAACACTCCAGCAAATAATACAAGTTTTACTCCAAATTATTAATAGTAAATTACAGTCTAGACTTTTGCTCTGGCACAGTCTAGACTAA
Protein
MIQSPTSFLIVLILLWCKLALSCFKECVITLQQIIQVLLQIINSKLQSRLLLWHSLD

Summary

Uniprot
A5Z139  
Pubmed
18295413    29141204   
EMBL
EF602450    KY799582    ABQ84847.1    AVI69486.1   
Pfam
PF03617   IBV_3A
Interpro
IPR005214   IBV_3A
ProteinModelPortal
A5Z139  

Ontologies

Subcellular Location

From MSLVP
Single-Pass Membrane

Topology

Length:
57
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
9.82071
Exp number, first 60 AAs:
9.82071
Total prob of N-in:
0.24374
outside
1  -  57
 
 
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