Strain
Bat_KY938558
(Region: South Korea: abandoned mine; Strain: Bat coronavirus strain 16BO133, complete genome.; Date: 17-Apr-16)
Gene
hypothetical protein
Description
Annotated in NCBI,
hypothetical protein
Location
GenBank Accession
Full name
SARS_X4 domain-containing protein
Sequence
CDS
ATGAAAATTATTCTCTTCTCGATATTGATTGTACTTGCAACTTGCGAGTTATATCACTATCAAGAGTGTGTTAGAGGTACTACTGTACTATTAGAGGAACCTTGCCCATCAGGAACTTACGAGGGCAATTCACCATTTCATCCTCTTGCTGATAACAAATTTGCACTAACTTGCATTAGCACACATTTTGCTTTTGCTTGTGCTGACGGTACTAGACATACCTATCAGCTTCGTGCAAGATCAGTTTCACCTAAACTTTTCACCAGACAAGAGAAAGTTTACCAAGAGCTCTATTCGCCGCTTTTTCTCATTGTTATTGCTTTAGTATTTATAATACTTTGCTTCACCATTAAGAGGAAGATAGAATGA
Protein
MKIILFSILIVLATCELYHYQECVRGTTVLLEEPCPSGTYEGNSPFHPLADNKFALTCISTHFAFACADGTRHTYQLRARSVSPKLFTRQEKVYQELYSPLFLIVIALVFIILCFTIKRKIE
Summary
Uniprot
Pubmed
EMBL
Proteomes
Pfam
PF08779
SARS_X4
SUPFAM
SSF117066
SSF117066
Gene 3D
ProteinModelPortal
PDB
1YO4
E-value=1e-55 Score= 168 Identity=94.05%
Cov(Q)=68.85% Cov(P)=96.55%
3D Structure
Ontologies
Subcellular Location
From MSLVP
Host nucleus > host nucleolus. Host cytoplasm. Secreted.
Topology
Length:
122
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
23.10265
Exp number, first 60 AAs:
2.03646
Total prob of N-in:
0.17182
outside
1 - 92
TMhelix
93 - 115
inside
116 - 122
