Strain
Bat_KY938558
(Region: South Korea: abandoned mine; Strain: Bat coronavirus strain 16BO133, complete genome.; Date: 17-Apr-16)
Gene
hypothetical protein
Description
Annotated in NCBI,
hypothetical protein
Location
GenBank Accession
Full name
Non-structural protein 7b
Alternative Name
Accessory protein 7b
Sequence
CDS
ATGAATGAGCTCACTTTAATTGACTTCTATTTGTGCTTTTTAGCCTTTTTGCTATTCCTTGTTCTAATAATGCTTATTATATTTTGGTTTTCACTTGAACTCCAGGATATAGAAGAACCTTGTAACAAAGTCTTTAAACCAGTATGA
Protein
MNELTLIDFYLCFLAFLLFLVLIMLIIFWFSLELQDIEEPCNKVFKPV
Summary
Miscellaneous
Bat coronavirus 279/2005 is highly similar to SARS-CoV (SARS-like).
Keywords
Host membrane
Membrane
Transmembrane
Transmembrane helix
Feature
chain Non-structural protein 7b
Uniprot
Pubmed
EMBL
Proteomes
Pfam
PF11395
DUF2873
Interpro
IPR021532
SARS-CoV_Orf7b
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Single-Pass Membrane
From Uniprot
Host membrane
Topology
Length:
48
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.50141
Exp number, first 60 AAs:
22.50141
Total prob of N-in:
0.77798
POSSIBLE N-term signal
sequence
inside
1 - 8
TMhelix
9 - 31
outside
32 - 48
