Strain
Horse_LC061272
(Region: Japan: Hokkaido, Obihiro; Strain: Equine coronavirus RNA, complete genome, strain: Tokachi09.; Date: 2009)
Gene
12.7 kDa accessory protein
Description
Annotated in NCBI,
12.7 kDa accessory protein
Location
GenBank Accession
Sequence
CDS
ATGGACATCTGGAGACCTGAGAGGAAATTTCTCCGTTTTACTAACGGATTTAATGTCCCAGAATTAGAAGATGTCTGTTTTAAATTTAATTACCAATTTCCTAAAGTAGGATATTGTAGAGTTCCTAATTATGCTTGGTGTCGTAATCAAGGTAGCTTTTGTGCTACATTTACCCTTTACGGCAAATCCAAACATTATGATAAATATTTTAGAATAATAACTGGTTTCACAGCGTTCGCTAATACTATAGAGGAGGCTGTTAACAAACTGGTTTTAGAGGCTGTTGATTTTATTATCTGGCGTAGCCAGAATTTAAATGCTTATGGCTGA
Protein
MDIWRPERKFLRFTNGFNVPELEDVCFKFNYQFPKVGYCRVPNYAWCRNQGSFCATFTLYGKSKHYDKYFRIITGFTAFANTIEEAVNKLVLEAVDFIIWRSQNLNAYG
Summary
Uniprot
Proteomes
Pfam
PF04753
Corona_NS2
Interpro
IPR006841
Corona_NS2
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Host nucleus > host nucleolus. Host cytoplasm. Secreted.
Topology
Length:
109
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.17425
Exp number, first 60 AAs:
0.01106
Total prob of N-in:
0.33547
outside
1 - 109
