CoVDB Coronavirus Database (v3)   
Strain
Porcine_LC063838 (Region: Japan: Miyagi;  Strain: Porcine epidemic diarrhea virus genomic RNA, complete genome, strain: MYG-1/JPN/2014.;  Date: 14-Jul)
Gene
hypothetical protein
Description
Annotated in NCBI,  hypothetical protein
Location
LC063838(+):24736-24987
GenBank Accession
BAT33282.1
 

Sequence

CDS
ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAATGA
Protein
MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFTSVFIYFFSQHQIVGITNAAFDSIQLDEYATISE

Summary

Uniprot
A0A286R3Q8  
EMBL
MF577027    ASV51732.1   
Pfam
PF03053   Corona_NS3b
Interpro
IPR004293   Coronavirus_Orf3b
ProteinModelPortal
A0A286R3Q8  

Ontologies

GO
GO:0016021  C:integral component of membrane

Subcellular Location

From MSLVP
Host nucleus. Host cytoplasm.

Topology

Length:
83
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
7.03433
Exp number, first 60 AAs:
6.29049
Total prob of N-in:
0.15806
outside
1  -  83
 
 
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