Strain
Porcine_LC260045
(Region: Japan: Hokkaido; Strain: Porcine deltacoronavirus genomic RNA, complete genome, strain: HKD/JPN/2016.; Date: 16-Sep)
Gene
envelope protein
Description
Annotated in NCBI,
envelope protein
Location
GenBank Accession
Sequence
CDS
ATGGTAGTCGACGACTGGGCCGTTACCATCCCCGGACAATATATTATTGCTATACTAGTTGTCATCTGCATTGGTGTGGCACTACTTTTTATTAATACTTGCTTAGCTTGTGTTAAATTATTTTACAAGTGCTACCTAGGGGCAGCATATCTTGTTAGGCCTATTATAGTGTACTACTCCAAGCCGAACCCCGTACCTGAGGATGAGTTTGTAAAAGTACACCAATTTCCTAGAAACACTCACTATGTCTGA
Protein
MVVDDWAVTIPGQYIIAILVVICIGVALLFINTCLACVKLFYKCYLGAAYLVRPIIVYYSKPNPVPEDEFVKVHQFPRNTHYV
Summary
Uniprot
Pubmed
EMBL
Proteomes
ProteinModelPortal
Ontologies
KEGG
Subcellular Location
From MSLVP
Host nucleus. Host cytoplasm.
Topology
Length:
83
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
28.5184
Exp number, first 60 AAs:
28.47845
Total prob of N-in:
0.00718
POSSIBLE N-term signal
sequence
outside
1 - 9
TMhelix
10 - 32
inside
33 - 83
