CoVDB Coronavirus Database (v3)   
Strain
Avian_LC364345 (Region: United Arab Emirates;  Strain: Quail coronavirus UAE-HKU30 411F genomic RNA, complete genome.;  Date: 2013/6/23)
Gene
NS7a protein
Description
Annotated in NCBI,  NS7a protein
GenBank Accession
 

Sequence

CDS
ATGGAGTTCCACTTAACTCTGCCATCAAACCCTCAGAGAACCATGGCTATTGGCTACGTTACACTAGACAAAAACCAGGTGGTGCTCAAATTCCTCCATCCTATGCCTTCTATTATACTGGCACAGGTCCGAGAGGAAATCTCAAGTATGGTGAACTCCCTCCTAATGATACCCAGGCAACCACTCGTGTTACTTGGGTTAAGGGTCCGGGAGCAGACACTTCTATTAAGCCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCACTCCGGTTTCCAACTGGAGATGGCCCGGCTCAAGGATTTAGAGTTGACCCCTTCAACGCAAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACACCAGAGGCAGTAATAATCAGCCCAGAAAACGCGACCAATCCGCGCCTGCCGCGGTCCGTCGTAAAACCCAACATCAAGCTCCCAAGAGGACTTTGCCCAAGGGCAAAACCATTTCTCAGGTATTTGGTAGCCGGTCTCGCACTGGTGCCAATGTTGGCTCTGCAGACACTGAGAAGTTGGGTATGGCTGATCCTAGAATTATGGCTCTAG
Protein
MEFHLTLPSNPQRTMAIGYVTLDKNQVVLKFLHPMPSIILAQVREEISSMVNSLLMIPRQPLVLLGLRVREQTLLLSLMLPNATPTILNISCYHSGFQLEMARLKDLELTPSTQEEDLRSVEVAQDLNLLTPEAVIISPENATNPRLPRSVVKPNIKLPRGLCPRAKPFLRYLVAGLALVPMLALQTLRSWVWLILELWL

Summary

ProteinModelPortal

Ontologies

Subcellular Location

From MSLVP
Single-Pass Membrane

Topology

Length:
200
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
17.58335
Exp number, first 60 AAs:
0.03666
Total prob of N-in:
0.31478
outside
1  -  200
 
 
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