Strain
Bat_LC469308
(Region: Japan:Tokyo, Okutama; Strain: Bat coronavirus Vs-CoV-1 genomic RNA, nearly complete genome.; Date: presumed 2019)
Gene
ORF5
Description
Annotated in NCBI,
ORF5
Location
GenBank Accession
Sequence
CDS
ATGGCTTTCTCTGTTTCTTTGTTTCGTCCCATTCAACTCGTTTCTGCTTTTCCTCATACTCATGAGGATACAGATGTGATAGGACGGCAAGCTGAGGAGCCCCAAGTTATATTATCATGCATTCCCACTGTAGGTTACAGTGCAGCTTTGGCTGTTAATGCATGCCTTATTCCACTCATACTTTGTCTTAATCAGGACACTTGTATGCGTAGTATAGTTAAGACCCTAATTCTTTATGGTCTCATGCTTTATAATTTTATCCTATCGGCCATTTTGGTCAGTGGGACCCATATGCCACTAGGTAGCTGCTTGCTAACCTTCGTTGTGGTACTATCCATACTTTGGTTTGTTGACAGAGTTCGTTTCTGTCTCATGCTGAGGTCCTATATTCCACTTATTGACATGCGCTCTCATTTTGTGCGTGTCACTACGTGCTCTTCACAGGGTCTTGTTGCTGTTAATAACAGCAAACCCTATTTCATACGAAACTTTGAACAGCAATGTCGCTGCTCTCGTTGTTTCTACGTGCATTCTGTCGCTTACATTGAGTGCACTTATATTAGTCGTTTCAGCAAAGTACAGCTTGTGTCTGTCACTGAATTTTCGCTGAACAACCACCGATCTACTGTCTTCGTGCCTGCTGTGCGCGACTCAGTACCTCTCCACATAATCGCACCAAGCGTGCTTTCGGTTTAA
Protein
MAFSVSLFRPIQLVSAFPHTHEDTDVIGRQAEEPQVILSCIPTVGYSAALAVNACLIPLILCLNQDTCMRSIVKTLILYGLMLYNFILSAILVSGTHMPLGSCLLTFVVVLSILWFVDRVRFCLMLRSYIPLIDMRSHFVRVTTCSSQGLVAVNNSKPYFIRNFEQQCRCSRCFYVHSVAYIECTYISRFSKVQLVSVTEFSLNNHRSTVFVPAVRDSVPLHIIAPSVLSV
Summary
Uniprot
Pubmed
EMBL
Proteomes
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Multi-Pass Membrane
Topology
Length:
231
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
61.34309
Exp number, first 60 AAs:
18.52992
Total prob of N-in:
0.01279
POSSIBLE N-term signal
sequence
outside
1 - 40
TMhelix
41 - 63
inside
64 - 75
TMhelix
76 - 93
outside
94 - 97
TMhelix
98 - 117
inside
118 - 231
