Strain
Porcine_MF041982
(Region: China; Strain: Porcine deltacoronavirus strain SHJS/SL/2016, complete genome.; Date: 23-Dec-16)
Gene
NS7 protein
Description
Annotated in NCBI,
NS7 protein
Location
GenBank Accession
Sequence
CDS
ATGGAGTTCCGCTTAACTCCGCCATCAAACCCGCTGAAAACCATGGCTACTGGCTGCGTTACACTAGACAAAAGCCAGGTGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTCCGGGAGCTGACACTTCTATTAAGCCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGCCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAG
Protein
MEFRLTPPSNPLKTMATGCVTLDKSQVVLRFLHPMPFIILAQVPEEILSMVNSLLMIPQQPLVLLGLRVRELTLLLSLMLPNATPTILNISCYLSDSQPEMAQLKVSELTPSTLEEDLRSVEVAQDLNLLTPEAQAISPGNATNLHQLRYAVRPSIKLPSGLYPRVKPFLRYLATGLVLVPMSALQTLRRRVWLILASWL
Summary
Uniprot
EMBL
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Single-Pass Membrane
Topology
Length:
200
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.28739
Exp number, first 60 AAs:
0.09253
Total prob of N-in:
0.05164
outside
1 - 200
