Strain

Porcine_MF083115 (Region: China; Strain: Porcine hemagglutinating encephalomyelitis virus strain CC14, complete genome.; Date: 14-Mar)

Gene

4.9 kDa non-structural protein

Description

Annotated in NCBI, 4.9 kDa non-structural protein

Location

MF083115(+):27682-27744

GenBank Accession

AVV64335.1

Full name

Truncated non-structural protein of 4.9 kDa

Alternative Name

Truncated 4.9 kDa accessory protein

Sequence

CDS

ATGACGATTAATTTCGTCTTTGGTTTCCATATAGTAACTTTAAGCATTTGCCAAAGTTTTTAA

Protein

MTINFVFGFHIVTLSICQSF

Summary

Similarity

Belongs to the coronaviruses ns4.9 protein family.

Keywords

Reference proteome

Feature

chain Truncated non-structural protein of 4.9 kDa

Uniprot

A0A2H4Z0C6 P0C2Q0 P0C2P9 Q2QKN2

Pubmed

12237422 16809333

EMBL

KY994645 MF083115 AUF40277.1 AVV64335.1 AF481863 AY078417 + More
DQ011855 AAY68298.1

Proteomes

UP000007543 UP000007546 UP000125924

Pfam

PF06145 Corona_NS1

Interpro

IPR009314 Corona_NS1

ProteinModelPortal

A0A2H4Z0C6 P0C2Q0 P0C2P9 Q2QKN2

Ontologies

Subcellular Location

From MSLVP

Extracell[Secreted, Extracellular]

Topology

Length:

Number of predicted TMHs:

Exp number of AAs in TMHs:

0.03262

Exp number, first 60 AAs:

0.03262

Total prob of N-in:

0.16319

outside

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