Strain
Human_OC43_MF374984
(Region: USA: Albuquerque, New Mexico; Strain: Human coronavirus OC43 isolate HCoV-OC43/USA/TCNP_00204/2017, complete genome.; Date: 3-Jan-17)
Gene
non-structural 5a protein
Description
Annotated in NCBI,
non-structural 5a protein
Location
GenBank Accession
Sequence
CDS
ATGGACATTTGGAGACCTGAGAAGAAATTTCTCCGTTATATTAACGGTTTTAATGTCTCAGAATTAGAAGATGCTTGTTTTAAATTTAACTATCAATTTCCTAAAGTAGGATATTGTAGAGTTCCTAGTCATGCTTGGTGCCGTAATCAAGGTAGATTTTGTGCTACATTCACTCTTTATGGTAAATCCAAACATTATGATAAATATTTTGGAGTAATAAATGGTTTCACAGCATTCGCTAATACTGTAGAGGATGCTGTTAATAAACTGGTTTTCTTAGCTGTTGACTTTATTACCTGGCGTAGACAGGAGTTAAATGTTTATGGCTGA
Protein
MDIWRPEKKFLRYINGFNVSELEDACFKFNYQFPKVGYCRVPSHAWCRNQGRFCATFTLYGKSKHYDKYFGVINGFTAFANTVEDAVNKLVFLAVDFITWRRQELNVYG
Summary
Uniprot
Proteomes
Pfam
PF04753
Corona_NS2
Interpro
IPR006841
Corona_NS2
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Host nucleus > host nucleolus. Host cytoplasm. Secreted.
Topology
Length:
109
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.35118
Exp number, first 60 AAs:
0.00035
Total prob of N-in:
0.32376
outside
1 - 109
