Strain
Murine_MF618253
(Region: USA; Strain: Murine hepatitis virus strain A59 isolate MHV-ExoN(-) P250, complete genome.; Date: 16-Jan-14)
Gene
phosphodiesterase
Description
Annotated in NCBI,
phosphodiesterase
Location
GenBank Accession
Full name
Non-structural protein 2a
Alternative Name
ns2
Sequence
CDS
ATGGCCTTTGCTGACAAGCCTAATCATTTCATAAACTTTCCCCTGACCCAATTTAGTGGCTTTATGGGTAAGTATTTAAAGCTACAGTCTCAACTTGTGGAAATGGGTTTAGACTGTAAATTACAGAAGGCACCACATGTTAGTATTACCCTGCTTGATATTAAAGCAGACCAATACAAACAGGTGGAATTTGCAATACAAGAAATAATAGATGATCTGGCGGCATATGAGGGAGATATTGTCTTTGACAACCCTCACATGCTTGGCAGATGCCTTGTTCTTGATGTTAGAGGATTTGAAGAGTTGCATGAAGATATTGTTGAAATTCTCCGCAGAAGGGGTTGCACGGCAGATCAATCCAGACACAGGATTCCGCACTGCACTGTGGCCCAATTTGACGAAGAAAGAGAAACAAAAGGAATGCAATTCTATCATAAAGAACCCTTCTACCTCAAGCATAACAACCTATTAACGGATGCTGGGCTTGAGCTCGTGAAGATAGGCTCTTCCAAAATATTTCAGGCAGTTATTGTCTGGTTTGTTATATAA
Protein
MAFADKPNHFINFPLTQFSGFMGKYLKLQSQLVEMGLDCKLQKAPHVSITLLDIKADQYKQVEFAIQEIIDDLAAYEGDIVFDNPHMLGRCLVLDVRGFEELHEDIVEILRRRGCTADQSRHRIPHCTVAQFDEERETKGMQFYHKEPFYLKHNNLLTDAGLELVKIGSSKIFQAVIVWFVI
Summary
Similarity
Belongs to the coronaviruses ns2a protein family.
Uniprot
Pubmed
EMBL
Pfam
PF05213
Corona_NS2A
ProteinModelPortal
PDB
4Z5V
E-value=2e-124 Score= 348 Identity=98.83%
Cov(Q)=93.96% Cov(P)=82.21%
3D Structure
Ontologies
Subcellular Location
From MSLVP
Cytoplasm
Topology
Length:
182
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.04579
Exp number, first 60 AAs:
0.01359
Total prob of N-in:
0.06435
outside
1 - 182
