CoVDB Coronavirus Database (v3)   
Strain
Murine_MF618253 (Region: USA;  Strain: Murine hepatitis virus strain A59 isolate MHV-ExoN(-) P250, complete genome.;  Date: 16-Jan-14)
Gene
ORF5a
Description
Annotated in NCBI,  ORF5a
GenBank Accession
 

Sequence

CDS
ATGAGACCAACAGCCACATGGATTTGGCATGTGAGTGATGCATGGTTACGCCGCACGCGGGACTTTGGTGTCATTCGCCTAGAAGATTTTTGTTTTCAATTTAATTATAGCCAACCCCGAGTTGGCTATTGTAGAGTTCCTTTAAAGGCTTGGTGTAGCAACCAGGGTAAATTTGCAGCGCAGTTTACCCTAAAAAGTTGCGAAAAACCAGGTCACGAAAAATTTATTACTAGCTTCACGGCCTACGGCAGAACTGTCCAACAGGCCGTTAGCAAGTAA
Protein
MRPTATWIWHVSDAWLRRTRDFGVIRLEDFCFQFNYSQPRVGYCRVPLKAWCSNQGKFAAQFTLKSCEKPGHEKFITSFTAYGRTVQQAVSK

Summary

Pfam
PF04753   Corona_NS2
Interpro
IPR006841   Corona_NS2
ProteinModelPortal

Ontologies

Subcellular Location

From MSLVP
Single-Pass Membrane

Topology

Length:
92
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00032
Exp number, first 60 AAs:
0.00018
Total prob of N-in:
0.47376
outside
1  -  92
 
 
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