Strain

Deer_MG518518 (Region: South Korea: Chungnam; Strain: Water deer coronavirus isolate W17-18, complete genome.; Date: 24-Feb-17)

Gene

12.7 kDa non-structural protein

Description

Annotated in NCBI, 12.7 kDa non-structural protein

Location

MG518518(+):28095-28424

GenBank Accession

AVN88329.1

Sequence

CDS

ATGGACATCTGGAAACCTGAGATTAAATATCTCCGTTATACTAACGGTTTTAATGTCTCAGAATTAGAAGATGTTTGTTTTAAATTTAACTATAAATTTCCTAAAGTAGGATATTGTAGAGTTCCTAGTCATGCTTGGTGCCGTAATCAGGGTAGCTTTTGTGCTACACTCACTCTTTATGGCAAATCCAAACATTATGATAAATATTTTGGAGTAATAACTGGTTTTACAGCATTCGCTAACACTGTAGAGGAGGCTGTCAACAAACTGGTTTTCTTAGCTGTTGACTTTATTACCTGGCGGAGACAGGAGTTAAATGTTTATGGCTGA

Protein

MDIWKPEIKYLRYTNGFNVSELEDVCFKFNYKFPKVGYCRVPSHAWCRNQGSFCATLTLYGKSKHYDKYFGVITGFTAFANTVEEAVNKLVFLAVDFITWRRQELNVYG

Summary

Uniprot

A0A3G3NH38

EMBL

MH687969 MH687971 MH687972 MH687973 MH687974 MH687975 + More
MH687976 MH687977 MH687978 AYR18609.1 AYR18627.1 AYR18636.1 AYR18645.1 AYR18654.1 AYR18663.1 AYR18672.1 AYR18681.1 AYR18690.1

Pfam

PF04753 Corona_NS2

Interpro

IPR006841 Corona_NS2

ProteinModelPortal

A0A3G3NH38

Ontologies

Subcellular Location

From MSLVP

Host nucleus > host nucleolus. Host cytoplasm. Secreted.

Topology

Length:

109

Number of predicted TMHs:

Exp number of AAs in TMHs:

1.06522

Exp number, first 60 AAs:

0.0026

Total prob of N-in:

0.35588

outside

1 - 109