CoVDB Coronavirus Database (v3)   
Strain
Deer_MG518518 (Region: South Korea: Chungnam;  Strain: Water deer coronavirus isolate W17-18, complete genome.;  Date: 24-Feb-17)
Gene
4.8 kDa non-structural protein
Description
Annotated in NCBI,  4.8 kDa non-structural protein
Location
MG518518(+):27892-28092
GenBank Accession
AVN88337.1
 

Sequence

CDS
ATGCCAATGGCCACAACCATTGATTGTACAGATTATACTAATATTATGCCTAGTACTATTTTTACAATAGTTCATTTAGGCGGTTTTATTGATACTAGCACCACTGGTTTTTCTCATGGTACTAGTTCCAAACCATATTATAATTCAGGTAGACCTTATAACTTTAAGCATTCTGCCAACGGTTTTAAGGCCACGCCCTAG
Protein
MPMATTIDCTDYTNIMPSTIFTIVHLGGFIDTSTTGFSHGTSSKPYYNSGRPYNFKHSANGFKATP

Summary

Uniprot
A0A3S7GYK6  
EMBL
MG757139    MG757140    MG757141    MG757142    AVI15013.1    AVI15024.1    + More
AVI15035.1    AVI15046.1   
Pfam
PF03905   Corona_NS4
Interpro
IPR005603   Corona_NS4
ProteinModelPortal
A0A3S7GYK6  

Ontologies

Subcellular Location

From MSLVP
Single-Pass Membrane

Topology

Length:
66
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
11.56142
Exp number, first 60 AAs:
11.56142
Total prob of N-in:
0.63182
POSSIBLE N-term signal
sequence
inside
1  -  66
 
 
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