CoVDB Coronavirus Database (v3)   
Strain
Avian_MG763935 (Region: India;  Strain: Infectious bronchitis virus strain IBV/Chicken/Haryana/53/2013, complete genome.;  Date: 2013)
Gene
protein 5a
Description
Annotated in NCBI,  protein 5a
Location
MG763935(+):25488-25685
GenBank Accession
AVX27617.1
 

Sequence

CDS
ATGAAATGGCTGACTAGTTTTGGAAGWGCAGTTATTTCTTGTTATAAAGCCCTACTATTAACTCAGTTAAGAGTATTAGATAGGTTAATTTTAGATCACGGACCAAAACGCGTCTTAACGTGTGGTAGGCGAGTGCTTTTATCTCAATTAGATTTAGTTTATAGGTTGGCATATACGCCCACCCAATCGCTGGTATGA
Protein
MKWLTSFGXAVISCYKALLLTQLRVLDRLILDHGPKRVLTCGRRVLLSQLDLVYRLAYTPTQSLV

Summary

Uniprot
A0A1P8FCL2  
EMBL
KX219801    APV46189.1   
Pfam
PF06336   Corona_5a
Interpro
IPR009404   Corona_5a
ProteinModelPortal
A0A1P8FCL2  

Ontologies

Subcellular Location

From MSLVP
Single-Pass Membrane

Topology

Length:
65
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.87013
Exp number, first 60 AAs:
2.86989
Total prob of N-in:
0.27025
outside
1  -  65
 
 
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