Strain
Bat_MG916904
(Region: China; Strain: Bat coronavirus BtCoV/Rh/YN2012 isolate BtCoV/Rh/YN2012_Ra13591, complete genome.; Date: 1-Jun-13)
Gene
ORF4a
Description
Annotated in NCBI,
ORF4a
Location
GenBank Accession
Sequence
CDS
ATGCTTGTCAATTGTGTTTACTCGCTTATTACAGTTGTCACATTGAATTGTACTTGGTTCTTGTTAGATGCTAACACTGTAACGATTTCTTTAAATGTGTCAGGTGCTCAACGTGTTGATTGGTTTAAAAACATCACTAAAAAGCTTTGTTCTGACGGACATTCTTTTCAAGGTGATGTTTTCATTTGTAATAAAACTACGCTTACTACTCAACTTAAAGTGGGTAGTAATGTTAGTTTTAATTTTCATGCAACACATGGTGGCACAGTACACAATGGCGTTTTTAATGTTAGCGTTTACGAATCAACAGCCATTACACAGCCCCCCCCTCTCTCATCTTTGTTGTCTCCTTTACATCACCAAGCTGTTGAATACCCCTCAACCAAACGACTATATTACCTGCTACCGCTAGCTTTCGTGATACCAGCTTGGTTGGTTGTGTTGTTTATTCACTATGCTGACTTTAGTAAATGA
Protein
MLVNCVYSLITVVTLNCTWFLLDANTVTISLNVSGAQRVDWFKNITKKLCSDGHSFQGDVFICNKTTLTTQLKVGSNVSFNFHATHGGTVHNGVFNVSVYESTAITQPPPLSSLLSPLHHQAVEYPSTKRLYYLLPLAFVIPAWLVVLFIHYADFSK
Summary
Uniprot
EMBL
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Host nucleus. Host cytoplasm.
Topology
Length:
157
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
35.32867
Exp number, first 60 AAs:
12.73514
Total prob of N-in:
0.51038
POSSIBLE N-term signal
sequence
inside
1 - 130
TMhelix
131 - 153
outside
154 - 157
