Strain
Cow_MH043955
(Region: USA: Pennsylvania; Strain: Bovine coronavirus isolate 7-16-23, complete genome.; Date: 16-Jul)
Gene
32 kDa protein
Description
Annotated in NCBI,
32 kDa protein
Location
GenBank Accession
Sequence
CDS
ATGGCAGTCGCTTATGCAGACAAGCCTAATCACTTTATCAATTTTCCACTTACCCAGTTTCAGGGTTTTGTGTTAAATTATAAAGGTTTACAATTCCAACTTCTCGATGAAGGAGTGGATTGTAAAATACAAACAGCGCCTCACATTAGTCTTGCTATGCTGGATATTCAGCCTGAAGACTACAGAAGTGTTGATGTCGCTATTCAAGAAGTTATTGATGATATGCATTGGGGTGAGGGCTTTCAGATTAAATTTGAAAACCCCCATATCCTAGGAAGATGCATAGTTTTAGATGTTAAAGGTGTAGAAGAATTGCATGATGATTTAGTTAATTACATTCGTGATAAAGGTTGTGTTGCTGACCAATCCAGGAAGTGGATTGGACATTGCACCATAGCCCAACTCACTGATGCTGCACTTTCCATTAAGGAAAATGTTGATTTTATAAACAGCATGCAATTCAACTATAAAATCACTATCAATCCCTCATCACCGGCTAGAATTGAAATAGTTAAGCTTGGTGCTGAAAAGAAAGATGGTTTTTATGAAACCATAGCTAGCCACTGGATGGGAATTCGTTTTGAATATAATCCACCCACTGATAAGCTAGCTACGATTATGGGTTATTGTTGTTTAGAAATGGTGCGTAAAGAGCTAGAAGAAGGTGACCTTCCCGAGAATGATGATGATGCTTGGTTTAAGCTATCGTACCATTATGAAAACAATTCTTGGTTCTTTCGACATGTCTACAGGAAAAGTTCTTATTTCCGTAAGTCTTGTCAAAATTTAGATTGTAATTGTTTGGGGTTTTATGAATCTTCAGTTGAAGAAGACTAA
Protein
MAVAYADKPNHFINFPLTQFQGFVLNYKGLQFQLLDEGVDCKIQTAPHISLAMLDIQPEDYRSVDVAIQEVIDDMHWGEGFQIKFENPHILGRCIVLDVKGVEELHDDLVNYIRDKGCVADQSRKWIGHCTIAQLTDAALSIKENVDFINSMQFNYKITINPSSPARIEIVKLGAEKKDGFYETIASHWMGIRFEYNPPTDKLATIMGYCCLEMVRKELEEGDLPENDDDAWFKLSYHYENNSWFFRHVYRKSSYFRKSCQNLDCNCLGFYESSVEED
Summary
Uniprot
Pubmed
EMBL
Proteomes
Pfam
PF05213
Corona_NS2A
Interpro
IPR039573
NS2A-like
ProteinModelPortal
PDB
4Z5V
E-value=4e-67 Score= 207 Identity=50.73%
Cov(Q)=73.74% Cov(P)=98.56%
3D Structure
Ontologies
KEGG
Subcellular Location
From MSLVP
Cytoplasm
Topology
Length:
278
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0422000000000001
Exp number, first 60 AAs:
0.04203
Total prob of N-in:
0.06652
outside
1 - 278
