Strain
Porcine_MH615810
(Region: China; Strain: Swine acute diarrhea syndrome coronavirus isolate SADS-CoV-CH-FJWT-2018, complete genome.; Date: 18-Mar)
Gene
NS7a protein
Description
Annotated in NCBI,
NS7a protein
Location
GenBank Accession
Sequence
CDS
ATGAACCAGCTTATCTTTTTCCTGTGTATGATGTGCTGTTATGCTATTCTTTTTGATTGGCTTTTTAATCTCTTCTTTTACGCTTGCCAGGTCAATACTTGGCAGGAGTTTGCTTTCTCATGTAACTGGAGTTGGTCACTTTTCTTTGAGGACTTCAGTACCTGGTTTAAATGCCTTTCTGTTGTTCTTATTGGTACTATTGCTGCTGCTAGCTTTATGTTTGCTGATTTCGCTGTTGAGGTCTTTGACCTCTTTGAGCGGTTTTTCATCAACGTTGGCAGATTTTGCAGATTTGTTTGA
Protein
MNQLIFFLCMMCCYAILFDWLFNLFFYACQVNTWQEFAFSCNWSWSLFFEDFSTWFKCLSVVLIGTIAAASFMFADFAVEVFDLFERFFINVGRFCRFV
Summary
Uniprot
Pubmed
EMBL
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Host nucleus. Host cytoplasm.
Topology
Length:
99
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
44.67807
Exp number, first 60 AAs:
26.78022
Total prob of N-in:
0.20382
POSSIBLE N-term signal
sequence
outside
1 - 3
TMhelix
4 - 26
inside
27 - 58
TMhelix
59 - 81
outside
82 - 99
