Strain
Human_OC43_MK303622
(Region: France; Strain: Human coronavirus OC43 isolate MDS11, complete genome.; Date: 2014/1/30)
Gene
nucleocapsid protein
Description
Annotated in NCBI,
nucleocapsid protein
Location
GenBank Accession
Sequence
CDS
ATGGCATCCTCAAGTGGGCCGATCAGTCCGACCAGTTTAGAAATGTTCAAACCAGGGGTAGAAGAGCTCAACCCAAGCAAACTGCTACTTCTCAGCAACCATCAAGAGGGAATGTTGTACCCCACTATTCTTGGTTCTCTGGAATTACTCAGTTTCAAAAGGGAAAGGAGTTTGAGTTTGCAGAAGGACAAGGTGTGCCTATTGCACCAGGAGTCCCAGCTACTGAAGCTAAGGGGTACTGGTACAGACACAACAGACGTTCTTTTAAAACAGCCGATGGCAACCAGCGTCAACTGCTGCCACGATGGTATTTTTACTATCTGGGAACCGGACCGCATGCTAAAGACCAGTATGGCACCGATATTAACGGAGTCTACTGGGTCGCTAGCAACCAGGCTGATGTCAATACCCCGGCTGACATTGTCGATCGGGACCCAAGTAGCGATGAGGCTATTCCGACTAGGTTTCCGCCTGGCACGGTACTCCCTCAGGGTTACTATATTGAAGGCTCAGGAAGGTCTGCTCCTAATTCCAGATCTACTTCGCGCACATCCAGCAGAGCCTCTAGTGCAGGATCGCGTAGTAGAGCCAATTCTGGCAATAGAACCCCTACCTCTGGTGTAA
Protein
MASSSGPISPTSLEMFKPGVEELNPSKLLLLSNHQEGMLYPTILGSLELLSFKRERSLSLQKDKVCLLHQESQLLKLRGTGTDTTDVLLKQPMATSVNCCHDGIFTIWEPDRMLKTSMAPILTESTGSLATRLMSIPRLTLSIGTQVAMRLFRLGFRLARYSLRVTILKAQEGLLLIPDLLRAHPAEPLVQDRVVEPILAIEPLPLV
Summary
Uniprot
EMBL
Proteomes
Pfam
PF03187
Corona_I
Interpro
IPR004876
Corona_nucI
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Host nucleus. Host cytoplasm.
Topology
Length:
207
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.11266
Exp number, first 60 AAs:
0.01929
Total prob of N-in:
0.01574
outside
1 - 207
