Strain
Avian_MK359255
(Region: Canada; Strain: Canada goose coronavirus strain Cambridge_Bay_2017, complete genome.; Date: 17-Aug)
Gene
ORF11
Description
Annotated in NCBI,
ORF11
Location
GenBank Accession
Sequence
CDS
TTGAGAGAGAAACTGTTGTTTAACAAAACAGTCATGAACCATGGTTCTCGTACTGTTCTTGTTCTTTCTTTTGTCAGTGTTCTATCTGTTTCTTTATGTGCAGTGTGGAATATTGATTGTCCAGTACCTCCTGATAAAACTGTTTGCTCAGTTGTTTCCAAGGATGGTAATTATATAGATAGGTTGGTTAATGTCACCTATTATAATAGAACTCAACAATCTTTCTGTGGCGAGTTTGGCTGTAGTGTTGAGGCTATACCAGCTGAGCTGTATTTTACAGCGATCTCTTTTGAGGAAGTTGGTAGTGTTAATTGTCAGGGTGCCATCGTGATGGGTTGTGTTACACAACTTAGCATTGATAGTTACATCTGTGAGCCATGCCACCTACAACCTCTTGTTGATTTAGTTGAGGAAAATTTGGCAGTTGTTGTTGTAGAACATGTGATTATAGGTCTTTTGTGTTGGGTTATAATCATGTTAGCTTTGTTGTTGTTTTTAAACCGGTGCAATAAGTATTGTCCTGCACCGGAGAGTTTTCATTGA
Protein
MREKLLFNKTVMNHGSRTVLVLSFVSVLSVSLCAVWNIDCPVPPDKTVCSVVSKDGNYIDRLVNVTYYNRTQQSFCGEFGCSVEAIPAELYFTAISFEEVGSVNCQGAIVMGCVTQLSIDSYICEPCHLQPLVDLVEENLAVVVVEHVIIGLLCWVIIMLALLLFLNRCNKYCPAPESFH
Summary
Uniprot
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Single-Pass Membrane
Topology
Length:
180
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
42.02276
Exp number, first 60 AAs:
19.51768
Total prob of N-in:
0.98424
POSSIBLE N-term signal
sequence
inside
1 - 18
TMhelix
19 - 38
outside
39 - 143
TMhelix
144 - 166
inside
167 - 180
