Strain
Bat_MK472069
(Region: Australia; Strain: Alphacoronavirus sp. isolate WA3301, complete genome.; Date: 2018)
Gene
ORF3
Description
Annotated in NCBI,
ORF3
Location
GenBank Accession
Sequence
CDS
ATGTTAGGTTTGTTTAACCTATACTTGGGTGGTGCACTTGAACAACAACATGTCAATAGACCCAACGTTACACCCATTAAGCATTTTAATTTGGGTGTTGATTACTTACTTACCGGCGTGTTTGTTTACTACTTCGCTGTTTTTCGTTGTAGTACTTACCGTCTCAACTTTGTTTGTGGCATCCTTAGACTTCTTACACTTTTTGTGTACGTACCCTTACTTTTGTATGTGGGTGCGTACATAGATGGAATTCTTATAGCCATATTGCTAATAGCTCGGCTCTTGTACCTTGTTGTTTTTAGCATCAAATGGAAGAGTCCCTACTATTTTGTACTTAATACTAGCCAACTAGCCTGGATTTTAGGCAAATGTTGGTATGTGGACTTAGATATGTATGTATGTCTCCGTGGAGGCAACTCATATTTAAAGTTTGGTCCACACTTTATACCATTTGTACGTACTGATAAGTTATTTATCACCGTACGTGGGAGAAAATCACTAATCGCCGAACTCGTTAGGAGGGTAGAGCTGATTAATGGTGATTTTCTTTATATCTTTGACACAACTCCATTTGTTAGTGTCATCAATCATATAACACCTAGTCTCAACTAA
Protein
MLGLFNLYLGGALEQQHVNRPNVTPIKHFNLGVDYLLTGVFVYYFAVFRCSTYRLNFVCGILRLLTLFVYVPLLLYVGAYIDGILIAILLIARLLYLVVFSIKWKSPYYFVLNTSQLAWILGKCWYVDLDMYVCLRGGNSYLKFGPHFIPFVRTDKLFITVRGRKSLIAELVRRVELINGDFLYIFDTTPFVSVINHITPSLN
Summary
Uniprot
EMBL
Pfam
PF03053
Corona_NS3b
Interpro
IPR004293
Coronavirus_Orf3b
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Multi-Pass Membrane
Topology
Length:
203
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
64.8144
Exp number, first 60 AAs:
23.8006
Total prob of N-in:
0.00234
POSSIBLE N-term signal
sequence
outside
1 - 30
TMhelix
31 - 48
inside
49 - 54
TMhelix
55 - 77
outside
78 - 80
TMhelix
81 - 100
inside
101 - 203
