Strain
Hedgehog_MK679660
(Region: United Kingdom; Strain: Hedgehog coronavirus 1, complete genome.; Date: 2014)
Gene
orf8b
Description
Annotated in NCBI,
orf8b
Location
GenBank Accession
Sequence
CDS
ATGGAAATCAACAAAATGGAAATAATCGAGGTAGACCAAGACAGCCTAAACCTCGACCAGCCCCAAACAATTCTGTCTCGTGGTACACTGGCATTACACAGCATGGTAAGCAACCTCTCGCCTTTCCGGCAGGACAGGGCGTACCTCTTAATGCCAATTCATCTCCCAAGCAAAATGCAGGGTATTGGCGTAGACAGGACAGAAAACTTAATACAGGCAATGGCGTCAAACAGCTGGCACCCAGGTGGTATTTTTACTACACTGGAACAGGACCAGAAGCCAACCTGGCATTTAGAACAGTCAAAGATGGCATCTACTGGGTTTGGGAGGAAGGTGCTAGTGAAGCCCCTTCAGAGTTTGGCACCAGGAATCCTGCTAATGACCCAGCTATTGTCACGCAGTTCGCTCCTGGTACTCAATTACCTAAAAACTGCCACATTGAGGGCACTGGGGGTAATAGTCAGTCATCTTCTAGAGCGTCCAGCACTAGCAGGAACTCCAGTAGATCTAATTCCAGAGGATCCCAACCTGGTAGTAGAAGCCACTCACCAGGAACTTCAGCAGGGCCCTCTGATGCATCAGCACTGCTCTATCTTGAACTAG
Protein
MEINKMEIIEVDQDSLNLDQPQTILSRGTLALHSMVSNLSPFRQDRAYLLMPIHLPSKMQGIGVDRTENLIQAMASNSWHPGGIFTTLEQDQKPTWHLEQSKMASTGFGRKVLVKPLQSLAPGILLMTQLLSRSSLLVLNYLKTATLRALGVIVSHLLERPALAGTPVDLIPEDPNLVVEATHQELQQGPLMHQHCSILN
Summary
Uniprot
EMBL
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Host nucleus. Host cytoplasm.
Topology
Length:
200
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.67937
Exp number, first 60 AAs:
0.00547
Total prob of N-in:
0.11510
outside
1 - 200
