Strain
Bat_MK720945
(Region: Hong Kong; Strain: Rhinolophus bat coronavirus HKU32 strain TLC26A, complete genome.; Date: 6-Aug-15)
Gene
X4-like protein
Description
Annotated in NCBI,
X4-like protein
Location
GenBank Accession
Sequence
CDS
ATGCGGATTTTAATCCTATTTTCCATTCTTGCACTTGTTGCATCTGTTGACATTGTTCACTACATTGATTGTATCGCTGGTTCTACAACAACATTTGGCCAGCCTTGTGAAGGTACAATTGAAAGTACATCACCAATTCAATTTGTGAGAGACCACCAGTATGGTCGCATTGCTGTCAGCTGTTTGCAAACCTATGTGCACAAAATCCGCATTGTCTGTCCTCATGGTAATCATACTTTTGTTGTAAGATCTACTACTTACAGAACCAACGTCCGCTATACACAACCGCAAGGAAGTGAGGTGCAGATGCTGATTCTAAGTCTTCTTATTGTCATTGTTCTTTACCTTTGTCTCAGACGCTAA
Protein
MRILILFSILALVASVDIVHYIDCIAGSTTTFGQPCEGTIESTSPIQFVRDHQYGRIAVSCLQTYVHKIRIVCPHGNHTFVVRSTTYRTNVRYTQPQGSEVQMLILSLLIVIVLYLCLRR
Summary
Uniprot
Pubmed
EMBL
Proteomes
Pfam
PF08779
SARS_X4
SUPFAM
SSF117066
SSF117066
Gene 3D
ProteinModelPortal
PDB
1XAK
E-value=9e-05 Score=38.5 Identity=30.56%
Cov(Q)=60.00% Cov(P)=86.75%
3D Structure
Ontologies
Subcellular Location
From MSLVP
Host nucleus. Host cytoplasm.
Topology
Length:
120
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
35.48243
Exp number, first 60 AAs:
16.83355
Total prob of N-in:
0.82834
POSSIBLE N-term signal
sequence
inside
1 - 2
TMhelix
3 - 22
outside
23 - 100
TMhelix
101 - 118
inside
119 - 120
