Strain
Camel_MN514966
(Region: Nigeria; Strain: Dromedary camel coronavirus HKU23 isolate DcCoV-HKU23/camel/Nigeria/NV1097/2015, complete genome.; Date: 12-Nov-15)
Gene
NS2 protein
Description
Annotated in NCBI,
NS2 protein
Location
GenBank Accession
Sequence
CDS
ATGGCAGTCGCTTATGCAGACAAGCCTAATCACTTTATCAATTTTCCACTTACCCAGTTTCAGGGTTTTGTGTTAAATTATAAAGGTTTACAATTTCAACTTCTCGATGAAGGAGTGGATTGTAAAATACAAACAGCGCCTCACATTAGTCTTGCTATGCTGGATATTCAGCCTGAAGACTACAGGAGTGTTGATGTCGCTATTCAAGAAGTTATTGATGACATGCATTGGGGTGAGGGCTTTCAGATTAAATTTGAAAACCCCCATATCCTAGGAAGATGCATAGTTTTAGATGTTAAAGGTGTAGAAGAATTGCATGATGATTTAGTTAATTACATTCGTGATAAAGGTTGTGTTGCTGACCAATCCAGGAAGTGGATTGGACATTGCACCATAGCCCAACTCACGGATGCTGCACTTTCCATTAAGGAAAATGTTGATTTTATAAATAGCATGCAATTCAATTATAAAATCACTATCAATCCCTCATCACCGGCTAGACTTGAAATAGTTAAGCTTGGTGCTGAAAAGAAAGATGGTTTTTATGAAACCATAGCTAGCCACTGTATGGGAATTCGTTTTGAATATAATCCACCCACTGAAAAGCTAGCTATGATTATGGGTTATTGTTGTTTAGAAGTGGTGCGTAAAGAGCTAGAAGAAGGTGATCTTCCCGAGAATGATGATGATGCTTGGTTTAAGCTATCGTACCATTATGAAAGCAATTCTTGGTTCTTTCGACATGTCTACAGGAAAAGTTCTTATTTCCGTAAGTCTTGTCAAAATTTAGATTGTAATTGTTTGGGGTTTTATGAATCTTCATTTGAAGAAGACTAA
Protein
MAVAYADKPNHFINFPLTQFQGFVLNYKGLQFQLLDEGVDCKIQTAPHISLAMLDIQPEDYRSVDVAIQEVIDDMHWGEGFQIKFENPHILGRCIVLDVKGVEELHDDLVNYIRDKGCVADQSRKWIGHCTIAQLTDAALSIKENVDFINSMQFNYKITINPSSPARLEIVKLGAEKKDGFYETIASHCMGIRFEYNPPTEKLAMIMGYCCLEVVRKELEEGDLPENDDDAWFKLSYHYESNSWFFRHVYRKSSYFRKSCQNLDCNCLGFYESSFEED
Summary
Uniprot
Pubmed
EMBL
Proteomes
Pfam
PF05213
Corona_NS2A
Interpro
IPR039573
NS2A-like
ProteinModelPortal
PDB
4Z5V
E-value=3e-65 Score= 202 Identity=51.24%
Cov(Q)=72.30% Cov(P)=96.63%
3D Structure
Ontologies
KEGG
Subcellular Location
From MSLVP
Cytoplasm
Topology
Length:
278
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0422200000000001
Exp number, first 60 AAs:
0.04205
Total prob of N-in:
0.06665
outside
1 - 278
