Strain
Bat_MN611517
(Region: Kenya; Strain: Rousettus aegyptiacus bat coronavirus 229E-related isolate 5425, complete genome.; Date: 18-Mar)
Gene
nonstructural protein NS4
Description
Annotated in NCBI,
nonstructural protein NS4
Location
GenBank Accession
Sequence
CDS
ATGGCTCTAGGTTTGTTTACATTGCAACTTGAGTCTGCTGTCAATCAATCGCTAAGCAAGGCGAAAGTTAGTGCTGAAGTCTCACGACAGGTTATTCAAGATGTGAAAGATGGCACTGTTACTTTCAATTTGCTAGCTTACACACTAATGAGCCTCTTTGTTGTGTATTTTGCTTTATTTAAAGCAAGATCACATCGTGGCAGAGCTGCTCTTATAGTGTTTAAAATTCTAATCCTCTTTGTTTATGTACCATTGCTGTATTGGTCTCAAGCTTACATTGACGCAACACTGATTGCTGTAATTTTGCTTGGTAGATTTTTCCACACAGCTTGGTACTGCTGGCTCTACAAAACATGGGATTTCATTGTCTTCAATGTAACCACACTTTGCTATGTGCAAGGTAAGTGTTGGTTTCTTGAAAATAAAGCTTTGAAACCATTTGTGTGCTTTTACGGAGGGGACCAATTCCTTTACATAGGCGACAAAATTGTTTCTTATGTCTCAACTAACGAATTATACGTTGCTCTTAGAGGACGTATTGACAAAGATCTCAGCCTTTCTAGAAAGGTTGAGCTTTATAACGGTGAATGTGTATACTTGTTTTGTGAACACCCAGCTGTTGGAATAGTCAACACAGATTTCAAATTAGAAATCTACGAAGATGTTCCTCAAGCTAGTGGATGA
Protein
MALGLFTLQLESAVNQSLSKAKVSAEVSRQVIQDVKDGTVTFNLLAYTLMSLFVVYFALFKARSHRGRAALIVFKILILFVYVPLLYWSQAYIDATLIAVILLGRFFHTAWYCWLYKTWDFIVFNVTTLCYVQGKCWFLENKALKPFVCFYGGDQFLYIGDKIVSYVSTNELYVALRGRIDKDLSLSRKVELYNGECVYLFCEHPAVGIVNTDFKLEIYEDVPQASG
Summary
Uniprot
EMBL
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Multi-Pass Membrane
Topology
Length:
227
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
65.1238300000001
Exp number, first 60 AAs:
21.72296
Total prob of N-in:
0.00325
POSSIBLE N-term signal
sequence
outside
1 - 37
TMhelix
38 - 60
inside
61 - 66
TMhelix
67 - 89
outside
90 - 92
TMhelix
93 - 115
inside
116 - 227
